Etheostoma cragini (Arkansas darter): 117953001
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Entry
117953001 CDS
T07493
Symbol
cxcr4b
Name
(RefSeq) C-X-C chemokine receptor type 4b
KO
K04189
C-X-C chemokine receptor type 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03250
Viral life cycle - HIV-1
ecra03260
Virion - Human immunodeficiency virus
ecra04020
Calcium signaling pathway
ecra04060
Cytokine-cytokine receptor interaction
ecra04144
Endocytosis
ecra04672
Intestinal immune network for IgA production
ecra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117953001 (cxcr4b)
03260 Virion - Human immunodeficiency virus
117953001 (cxcr4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117953001 (cxcr4b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117953001 (cxcr4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117953001 (cxcr4b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117953001 (cxcr4b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117953001 (cxcr4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ecra04030
]
117953001 (cxcr4b)
04050 Cytokine receptors [BR:
ecra04050
]
117953001 (cxcr4b)
04090 CD molecules [BR:
ecra04090
]
117953001 (cxcr4b)
G protein-coupled receptors [BR:
ecra04030
]
Rhodopsin family
Chemokine
CXC Chemokine
117953001 (cxcr4b)
Cytokine receptors [BR:
ecra04050
]
Chemokine receptors
CXC Chemokine
117953001 (cxcr4b)
CD molecules [BR:
ecra04090
]
Proteins
117953001 (cxcr4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
CXCR4_N
Motif
Other DBs
NCBI-GeneID:
117953001
NCBI-ProteinID:
XP_034741589
LinkDB
All DBs
Position
11:complement(20032780..20034432)
Genome browser
AA seq
377 aa
AA seq
DB search
MELDVTYTFDNSTDNMSEESGDFDLDFQEPCGRVLSSEFNKIFLPTVYGIIFILGVIGNG
LVVVVMGYQKKVKTMTDKYRLHLSVADLLFVLTLPFWAVDAAKSWYFGGFLCVSVHMIYT
VNLYSSVLILAFISLDRYLAVVRATNSQATRKLLASRVIYVGVWLPAAVLTVPDLVFARV
QDKDSSNFHIFDESMETGDSLERIICQRIYPQTTSLIWTVVFRFQHILVGFILPGLVILV
CYCIIIAKLSKGAKGQALKKKALKTTVILILCFFSCWLPYCVGIFLDNLMMLNVVPQSCE
LQQAVETWISITEALAYFHCCLNPILYAFLGVKFKKSAKSALTASSRSSQKVTLMTKKRG
PISSVSTESESSSVLSS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgatgttacatatacctttgacaacagtactgacaacatgtcggaggagtct
ggagactttgacctggacttccaggagccatgtggcagagtactcagcagtgaattcaac
aagatcttcctaccaacagtttatggaattatatttattctgggagtcattggcaatgga
ttggtcgttgttgtcatgggctaccagaaaaaggtcaagacgatgacggacaagtaccgg
cttcatctctccgtggctgacctcctgttcgtcctcaccctgcccttctgggccgttgat
gccgccaaatcctggtactttgggggtttcctctgtgtgtctgtgcacatgatctacaca
gtgaacctgtacagcagcgtgttgatcttggccttcatcagtctggacagatacttggca
gttgtgcgagccaccaacagccaagccacaaggaagctgcttgcaagcagagtgatctat
gtgggtgtgtggctgcctgccgctgttctgactgtacctgacctggtgtttgccagggtg
caggacaaagactcttcaaacttccacatttttgacgaaagcatggagactggagactca
ttggagaggatcatctgccagcgcatctacccgcagacaaccagtctcatatggacagtc
gttttccgcttccagcacatcctggtgggcttcatactgcctggtctggtcatccttgtc
tgctattgcatcatcatcgccaagctgtcgaaaggcgccaagggccaggctctgaagaag
aaagcgctgaagaccaccgtcatcctcatcctttgttttttctcctgctggctgccctac
tgtgttggaatctttttggacaatctgatgatgctgaacgtggtccctcagtcttgcgag
ttgcaacaagcggtggagacgtggatttctatcacagaggcgctggcctattttcactgc
tgcctcaaccccatcctctatgccttcctgggagttaagttcaagaaatcagcaaagagt
gccctgacagccagcagcagatcaagtcagaaagtgactctcatgacaaaaaagagaggg
ccaatttcatcggtgtcaactgagtccgagtcctcaagtgttttgtcaagttaa
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