KEGG   Etheostoma cragini (Arkansas darter): 117953083
Entry
117953083         CDS       T07493                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecra03036]
    117953083 (kdm6a)
Enzymes [BR:ecra01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     117953083 (kdm6a)
Chromosome and associated proteins [BR:ecra03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     117953083 (kdm6a)
   Histone demethylases
    117953083 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 JmjC KDM6_GATAL TPR_2 TPR_8 TPR_17 TPR_12 TPR_16 TPR_11 TPR_9 TPR_19 TPR_7 TPR_CcmH_CycH ARM_TT21_C RPN7 ANAPC3
Other DBs
NCBI-GeneID: 117953083
NCBI-ProteinID: XP_034741709
LinkDB
Position
11:3728230..3779907
AA seq 1469 aa
MKSCGVSLTAAASAAARSLGVAAGNDEEKMASGTATDIEEDFPKLTAQEKESLVGTDSSL
FGFHRLQEDGARTKALLLKAVRCYEALILKAEGKVDPDIFCQLGHFNLLLEDYPKALSAY
QRYFSLQSDYWKNAPFLYGLGMVYFHYNAFHWAIKAFQEVLYIDPGFLRSKEIHLRLGLM
FKANTDYESSLKHFQLALIDSNLCTLSKAEIQFHIAHLYEIQKKHRAAKEAYESLLQTDN
LPAQVKATTLQQLGWMHHTVEQLGDKGTKDSYAIQCLQKSLEADPNSGQSWYFLGRCYSS
IGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAWM
DLGTLYESCGQPHDAIKCYINATRSKACLNTAALTQRIKLLQAQLCNLQPDSLQNKSKML
PSIEEAWSLPIPAELTSRQGALNTAQAQQACKGEGGQSASNHTDPQASPAKRKRTASPAK
GVADSWAISSNQQQIPSWYLTPQKLQHLDHLRTNRANLKPPQVQMLEQLENQFSLMQQHQ
QQQMRQQAAASGQTRPSLPNGPLAEPSNHHAGLSRVSPLNHTAIRPPCVPQPTANGSCSS
SPSAGLPGHLDKNHTLGLGGGSASNGNVPYPQQNSLPHNCTAASHPSTSSTTSSPSHADE
TWKSQQRNTTTQGLQKGPGSHSAGPNGEPPFSSSSSSPQTSFSSSGILNQVGHSSGPCTV
SSSASSLSPTSPQTTPNHLSSPHHTATTSGVHTKDATPSGGNTGSNGAATFPSGMEAAVR
HSAGSPLSPSTAPAQRLTNHVQPRATDGSPAPGVLSSDNPQLSALLKGKANATSNDDNNN
SSNHGGPFLEKINNVHSRLHGAAKPTSEQPLASSPLLAAATPSPRSAHPHADNSLSCLNS
PSTTNSQGPTVNGKGPEDSQSPLKVESSGGAQRHGVPAGLAPWSSVSIYPSSSEVLKACR
NLGKNGLSTSSILLDKCPPPRPPRPPSPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCT
NPANPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLAQPTDENWDPSGSRKMW
RCESSRSHTTVIKYAQYQASSFQESLREENEKKKDVEAEAGSSDSAMRRRKGSFKHLKFG
TNIDLSDEKKWKQQLQELSKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPG
HQENNNFCSVNINIGPGDCEWFAVPETYWGVINDFCEMNNINFLMGSWWPNLEDLYETNV
PVYRFIQRPGDLVWLNTGTIHWVQAIGWCNNIAWNVGPLTAHQYKLAVERYEWNKLQSVK
SIVPMIHLSWNMARNIKVSDHKLFEMIKYCLLRTLKQCQMQRELLLAAGKDLVWHGRTQS
EPAHYCSICEVEVFDLLFVTTESNHRKTYVVHCQDCARRGSANLDNFVVLEQYKIEDLMH
VYDQFTLVSNGCTGPVQTRADPFKHRGDL
NT seq 4410 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcaccgccgctgcatctgctgctgcccggagcctcggc
gttgctgctggtaatgacgaggagaaaatggcgtcgggaacagcgactgatatcgaagag
gactttccgaagctaacagcacaagaaaaagagagcctggtcggaactgacagttcactg
tttggatttcacaggcttcaagaagatggcgccagaacgaaggccttgctgttaaaggct
gttcgctgctatgaggctctcatcctaaaagcagaggggaaagtggaccctgacattttc
tgtcaactgggccacttcaaccttctgctggaggactatccaaaagcattatctgcatac
cagaggtacttcagtttacagtcggactactggaagaatgctccctttttatatggcctt
ggcatggtgtacttccattacaacgcatttcactgggcaatcaaggcgttccaggaggtg
ctttacatcgaccccggctttttgaggagtaaagagattcacctaagactgggactcatg
tttaaagccaacacagactacgagtcaagcctaaagcattttcagctggctttgatcgac
tctaatctctgcactttgtccaaagctgaaattcagttccacattgctcatttgtatgag
atccagaagaagcacagagcggcgaaagaagcgtatgaaagtctgttgcagacggataat
cttcctgcacaggtgaaggcgaccacactgcaacaacttggctggatgcatcacacggtg
gagcagctgggggataaaggcaccaaggacagctatgccattcagtgtctgcagaagtct
ttagaagcagacccaaactctggccagtcctggtactttcttggcaggtgctactccagt
attgggaaggtgcaggatgccttcatctcttaccgtcagtccatcgataagtcggaggcc
agtgctgacacctggtgctccataggggtgctctaccagcagcagaaccagcctatggat
gcactgcaggcctacatctgcgctgttcaactggaccacagccacgcggccgcctggatg
gacctgggcaccctctacgaatcctgcgggcagccgcacgacgctattaagtgctacatc
aatgctacgcgcagcaaagcatgcctcaacactgctgcactcacgcaacgcattaagctg
ctgcaggctcagttgtgtaacctacagccagatagtctgcagaataagagtaaaatgctt
cctagtattgaggaggcgtggagcctccccattcctgctgagctcacgtccaggcagggg
gccttgaacactgcacaggcacagcaggcctgtaagggggaggggggccagtcggccagc
aatcacacagacccacaggccagtcctgccaagaggaaacgcactgccagcccagctaag
ggcgttgcagactcgtgggcaatcagctccaatcaacagcagatccccagctggtaccta
acgccccagaaacttcagcatttggatcacttgcggaccaaccgagcaaacctcaagccc
ccccaggtgcagatgctggagcagctggagaaccagttctctctcatgcagcagcatcag
cagcagcagatgaggcagcaggcagcagcgagtggccagacgcgtcccagccttcccaac
ggtcctttggctgagccctctaaccaccacgcaggcctctcccgcgtctcccccctcaat
cacacagccattcggcccccctgtgtcccccagcccacagccaacggatcctgttcttca
agtccttcagccgggctgccgggacacctggacaaaaatcacacactgggactgggaggt
ggcagcgcgagcaacggaaacgtgccttacccgcagcagaactctctacctcacaactgc
acagccgccagtcacccaagcaccagcagcactactagtagtcccagtcatgcagacgag
acatggaagagccaacaacgcaacactaccactcaggggcttcaaaaaggtccaggttca
cattcggcaggtcccaatggagaaccccctttctcttcctcgtcctcctcccctcagacc
tcgttctcttcctctggcattctgaatcaggtcggacattcctctgggccctgtactgtc
tcctcctcggcatcctctctgtcccccacctccccccagaccacgcccaaccacttgtcc
tccccccaccacaccgctactacctcaggggtccacaccaaagacgccacgccttcaggg
ggcaacaccggcagcaacggcgccgccacttttccatcaggtatggaggccgctgtcagg
cattccgcagggtcgcccctaagtccaagcaccgcccccgcgcagagactgactaatcac
gtccagccgcgggcgacggacggctctcccgcccccggcgtgctcagttcggacaatcct
cagctctcagccttgctaaagggaaaagccaatgccaccagtaacgacgacaacaataac
tccagtaaccacggagggcctttcttggagaaaatcaacaacgtccactcgcgtctccac
ggtgccgccaagccaacgtcggagcagccgctggcctcctcgccgcttttagccgctgct
actccctcgccgcgctcagcacaccctcacgccgacaacagcctctcctgccttaacagc
ccgtccaccactaacagccaggggcccacagtcaatgggaaggggcccgaggactcccag
agcccactgaaggtcgagtcttctggaggagctcagagacacggcgtccccgctggtcta
gcaccctggtcctcggtctccatctaccccagctccagtgaggtgctcaaagcatgcagg
aacctggggaagaacggcctgtccacgagcagcatcctcctggacaagtgtcccccgcca
cggcccccccgcccgccctctcctccactgccaaaggacaaactcaatcccccaacaccc
agtatttatctagaaaacaagagggacgccttcttccctcctctccaccagttctgcacc
aaccctgccaacccggtcaccgtcatcagagggctggctggagcactcaaactagatctg
ggcctgttctccacgaagacgttggtggaggccaacccggaccatctggtggaggtgcgg
acccagctggctcagcccaccgacgagaactgggacccgagcggcagcaggaagatgtgg
cgttgcgagagcagtcgctcccacaccaccgtcatcaaatacgcccagtaccaggcctcg
tccttccaggagtcactgcgggaggagaatgagaagaagaaggatgtggaagcagaagca
ggttcctcagacagtgcaatgcggcgaaggaaagggtctttcaaacacctgaagtttggc
acaaacatcgacctctctgatgaaaagaagtggaaacagcagcttcaggagttgtccaaa
ctgccggcgtttgctcgtgtggtgtcagccggcaacctgctaagccacgtaggacacacc
atcctgggcatgaacacggtccagctctacatgaaggtgccaggcagccggacaccaggt
caccaagagaacaacaatttctgttcagtcaacatcaacatcggtcccggggactgcgag
tggttcgccgtgccggaaacgtactggggcgtcatcaacgacttctgtgaaatgaacaac
atcaacttcctgatgggctcttggtggcccaacctggaggacctgtacgagaccaacgtg
cccgtttaccggttcatccagcgtcccggggacctagtgtggctcaacacaggcaccatc
cactgggtgcaggccatcggctggtgcaacaacattgcgtggaatgtcgggcccctcaca
gcacatcagtacaagctggcggtggagcgctatgagtggaacaaactgcagagtgtcaaa
tccatcgttcccatgatccacctctcctggaacatggccaggaacatcaaagtctcggac
cacaagctctttgagatgatcaagtactgtttgttacggactctgaagcagtgccagatg
cagcgggagctgctgctggctgctgggaaagacctggtgtggcacgggaggacgcagagc
gagcccgcacattactgcagtatctgtgaggtggaggtgttcgacctgctgtttgttacc
acggagagcaaccacaggaagacgtacgtggtgcactgtcaggactgcgcccgtcggggg
agcgccaacctggacaactttgtggtgctggagcagtacaagatcgaggacctcatgcat
gtttatgaccagttcacactcgtaagtaacggctgtaccggtcccgttcagacccgagca
gatccgtttaaacacagaggagacctgtga

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