Etheostoma cragini (Arkansas darter): 117953688
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Entry
117953688 CDS
T07493
Symbol
nectin4b
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ecra04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117953688 (nectin4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117953688 (nectin4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117953688 (nectin4b)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Nectin family
117953688 (nectin4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
TMEM154
Protocadherin
EphA2_TM
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
117953688
NCBI-ProteinID:
XP_034742843
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All DBs
Position
12:complement(20439260..20466521)
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AA seq
581 aa
AA seq
DB search
MELTGQRAKCLALLLLVAVCVQGVFVEPPQAVTSLRSFAESQTRLPCHYQEDEGEKVVQV
TWYKELPDGSTDQIITAHFIDGHTEFGRYSGRVRFESGSPTVNSALLILSTEESDEGNYA
CRISTFPNGNFERHITLTVWILPISSLEPMLLVEGQPFGVVASCRAVGRPPPRLSWDTEL
PGRSQNRSKEGGAVSSYFSLHPLRSMNGKKLDCLVWHPGLEQPRRISHRLLVQYPPDATI
SSGTVDWFVGLEKAELVCGSGGNPKPQNFTWTWKGGALPDGVSGVGERLVFGRGLRMNDS
GLYECVVKNAVGAAKAEFMLTLTKTSQLKGKFPMDNMLLIIIGASAGALVLILVLVVLLV
NRYHRHRNKKLQMELSEKTEEIQSFSRQASFRRLNSVSTDPRVQAEDSRMKSSQLSLERT
MYKGSQSTLGGKWGSAGGVEVDELGRPVLWHNGRDSLRGAEMDGEKEEQRRRVESYLKNS
NMSLDSGLPSSLVPLKAQQDESGVGPREPDLGHVEEGDSPRGEDWPPPPTQAVAEGHDDD
NESSSYQLSEALTHHFYYSKGVLRPRPHSNAILLHPRGQII
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggagttgacggggcaaagggcaaagtgtctggcgctgctcctactagttgccgtttgt
gtgcagggtgtctttgtggagcctccccaggccgtcacctccctgcgctccttcgcagag
agccagaccaggctcccctgtcactaccaggaggacgagggggagaaggtggtgcaggtc
acctggtacaaggaactcccagacggcagcacggaccagatcatcacggcccacttcata
gacggccacacagagtttgggcgttactccggccgggtgagattcgagagcgggagcccc
acggtgaattcggctctgctcatcctcagcacagaggagtcggacgagggcaactacgcc
tgccgcatctccaccttcccaaacgggaactttgagaggcacatcacactgaccgtttgg
attctacctatctcctccctggagccgatgctactggtagagggccagccgttcggggtg
gtcgcttcctgtcgagccgtgggccgccctcctcctcggctctcctgggacaccgaactg
ccaggtcgctcccaaaaccgcagcaaagagggcggggccgtgtccagctatttctccctg
caccccctgcgcagcatgaatgggaagaagctggactgtctggtgtggcatcccggcctg
gagcagccgcgtaggatctctcaccgcctgctggtgcagtaccccccagatgccaccatc
tcctctgggacagtggactggtttgtgggtttggagaaagctgagctggtgtgcggcagt
ggaggaaaccccaaacctcagaacttcacctggacgtggaagggaggagctttgccagat
ggggtgtccggggttggagaaagacttgtttttgggcggggcctccgcatgaatgacagc
gggctctatgagtgtgtggtcaaaaacgccgtgggagcggcaaaagcagagtttatgttg
acattaacaaagacatcacaactcaagggcaagttccccatggacaacatgttgctcatc
attattggggcttcagccggcgctttggtcctgatcctggtcctggtggttctgctggtc
aaccgctaccatcgacatagaaacaaaaagcttcagatggagctcagcgagaaaacggag
gaaattcaaagcttctcccgacaagcctcctttagaagactgaactctgtcagcacagac
cccagagtgcaggctgaagacagcagaatgaaaagcagccaattatctctggaacgaacc
atgtacaaaggcagccagtccactctgggcgggaagtgggggtctgcaggaggggtggag
gtggacgaactgggacgtccagttctctggcacaacggcagagacagcctgagaggagca
gagatggatggagagaaggaggaacaaaggagaagggtggagtcctacctgaagaacagt
aacatgtcactggactcaggtctgccctcttccttggttcccctgaaggcccagcaggat
gaaagcggcgtggggcccagagagccagacctgggccacgtcgaagagggcgactccccg
cggggagaggactggcctccgcctcccacccaggcggtagccgagggacacgatgatgac
aatgaaagcagctcctaccagctgtcagaggctctcacacatcacttctactacagtaag
ggcgtcctccggcccaggccacactccaacgccattctgctgcaccccagaggacagatc
atctag
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