Etheostoma cragini (Arkansas darter): 117954876
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Entry
117954876 CDS
T07493
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
ecra04520
Adherens junction
ecra04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117954876
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117954876
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117954876
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117954876
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117954876
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117954876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
V-set
Fn3_VIN3
DSPc
Y_phosphatase3
C2-set_2
PTPlike_phytase
Fn3_PTPRU
PTP-NADK
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
117954876
NCBI-ProteinID:
XP_034744811
LinkDB
All DBs
Position
12:10961901..11132269
Genome browser
AA seq
1928 aa
AA seq
DB search
MVPNFHLTMPLLPRGALLFLLLLSCMVFSFQAEALPTFVKFPVDQTGISGGVASFVCQAA
GEPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEIN
TSAKLTVLEENQIPHGFPTIDMGPQLKVVEKTRTATMLCAASGNPDPEISWFKDMLPVDI
SSSNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRDQREV
RRVPPRFSIPPTNQEVMPGGSVNLTCVAVGSPMPYVKWTMGQVELTKEEEMPLGRNVLEV
TNIRESANYTCVAISSLGMIEATAQVTVKALPKPPTSLIVTETTATSVTLTWDSGNPEPV
SYYMIQYKAKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETR
TGEQAPSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLTAPLSAWQKHNT
DDSSLTTISGLTPDITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDSR
IMLTWLWPVQDPITKYELQYWEAGSENKIHVLFNPAGSYAVDGLKPDTLYRFSLAARSEM
GLGVYTQPIEARTAQSTPSAPPQDVQLVSLSSTTLKVSWVAPPAASRHGAIVRYTVSYQA
LAGEDTERHEVTGIGADATSYLLEGLEKWTEYQVWVRAHTHVGPGPESAPMRMKTKEDVP
GAPPRKLEVEAINSTAIRVTWKPPLQGKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALP
EAQWNIEESTEHEAIIGGLHSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGKPTMMI
STTMGNTALTQWQPPKEMVGELMGYQLQYKRTDEETYTSRELRKTDDHYTVTGLHRGATY
VFRLSARNRAGLGEAYVKEISTPEDVPSGFPFNLQVTGLTQSSTQLTWEPPLQAERNGKI
AYYMVVYRDINSQQNSTNRTADTHMTIQGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTM
SNDFPTLNFGVKAVMKTSVLLTWDLPPNYKSQVPFKILYNQQSVEVQGNLKRKLIAQLQP
DTDYSFVLTSRGNIAGGLQQQVSIRTAPDLIKTKPSTHQAQGGKMTINLPKVLTTTRVRW
YYIVVVPVSQSTRRWKNPDEMDLDELLKSSEGPSLRRRRHLDSSKPHIAAKLASLPATFT
VGDEKRYNGFYNKPLTSPQEYLCFVLAVLRYEGTDSSANYMTFSASPYSDPIQVTTNMAQ
GMEQPEMLWVMGPVLAVVLIIIIVIAILLFKNSKQERKRASPLPKDEHSGGVKDSLLANS
SDPVEMRRLNYQTPGPSSHRCPNTPRMREHPPIPVIDLADHIERLKANDGLRFSQEYESI
DPGQQFTWENSNMEVNKPKNRYANVIAYDHSRVVLTSVDAVPGSDYINANYIDGYRKQNA
YIATQGPLPETLSDFWRMVWEQRSNTIIMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTM
LDTVELATYSVRTFALYKNGSSEKREMRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPP
DAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIF
IHEALLEAATCGNTEVPARNLFAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISA
NLPCNKFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGPLAET
TEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYIL
REFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITIHC
SAGVGRTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYL
GSFDHYAT
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaattttcatctgacaatgcccctcctgcccagaggggcattgctgttcctg
cttctactcagctgcatggtgttctcctttcaggcagaagctttgccaacgttcgtcaaa
ttcccagttgaccagacgggcatctcgggtggagttgcatcgtttgtgtgtcaggccgcc
ggggaacccaaacccagaatcacctggatgaaaaaaggcaagaaagtcagctcccagcgc
tttgaggtgattgagtttgatgacggctcgggctccgtactgaggatccagccactgcgc
acacacagagacgaagccatttacgagtgcacagccaccaacagtgctggcgagatcaac
accagtgccaagcttacagtgctcgaagagaaccagatcccccatggctttcccaccatt
gatatgggtcctcagctgaaggtggttgaaaagaccagaactgccaccatgctgtgtgct
gccagcggaaacccggaccctgagatatcctggttcaaggacatgcttcctgtggacatc
agcagcagcaatgggcgtattaaacagcttcgttcaggtggtacaccaattagaggagct
ctgcaaattgagaacagcgaggagtccgaccaagggaaatacgaatgcgtcgccacgaac
agtgctgggacccgttactccgctcctgccaatctctacgtacgagatcagcgtgaagtg
cgaagagtcccacccagattctccattccacccaccaaccaagaggtgatgccggggggc
agcgtcaacctgacatgtgtggcagtgggttcgccgatgccctatgtcaagtggacgatg
ggtcaggttgagctaaccaaggaggaagagatgccattgggacgaaacgtgctagaagtc
accaacatccgtgagtcggccaactacacctgcgtggccatctcctctctgggcatgata
gaagccaccgctcaggtcactgtcaaagccttgccaaagccccccacctccctcattgtg
actgagaccacagccaccagtgtgactctcacctgggactctggaaacccagaacctgtc
tcctactatatgatccagtacaaagccaagtcctcagacaatggctttcaggaagtggaa
ggtgtggcaactacccgttacagcattggtggacttagcccctactctgagtatgagttt
cgtgtcatggctgtgaacaacattggccgcgggccgcccagcgaccctgtggagacgcgc
accggtgagcaggccccctcctcgccacctctgcatgtccaagcgcgcatgctgagcgcc
agcacaatgctggtgcagtgggaaccgcccgaggaacccaacgggcaaatcaggggctac
cgggtctactacagctcagacctgacagctccgctcagcgcttggcagaaacacaacaca
gatgacagcagtctaactaccatctcaggcctgactcccgatatcacctacagcctcagg
gtgctgggcttcacctctgtaggtgacggcccaccttctgacatcctgcaagtcaaaacc
cagcagggagtccctgcccagccgtccagctttgaggctgaagcagagctggacagccgc
atcatgctaacgtggctgtggcccgtacaggaccctatcacaaagtatgagctgcagtac
tgggaggccggctcagagaacaagatacatgtgctctttaacccagctggctcctatgct
gtggatggtttaaagcctgacaccttgtatcgtttctcgctggcagcccgttctgaaatg
ggtttaggcgtctacacccagcccatcgaggctcgcaccgcccagtccaccccatccgcc
ccccctcaggatgtacagctggtcagcctgagctcgaccactctcaaggtgagttgggtg
gcaccgcccgccgctagccgccacggcgccattgtgcgctacacagtcagctaccaggcc
ctggctggagaggacacagagcggcatgaggtgacgggcatcggcgcagatgccaccagc
tatttgctggagggcctggagaagtggactgagtatcaggtgtgggtgagggcacacact
cacgtgggcccaggccctgagagtgccccaatgaggatgaaaaccaaagaggatgtgccg
ggagcaccccccaggaagctggaggttgaggccatcaactccacagcaatccgggtaacg
tggaagccgcccctgcaggggaagcagcacggccaaatccgaggctaccaagtcatcttc
tctcgacttgaaaacggtgaaccgcgaggccagcctaacatcatggatgttgccttgcca
gaggcacagtggaatattgaggagtccaccgagcatgaggccatcattggtggactgcac
tctgaaaccacttactctgtcactgtagcagcatacaccaccaagggagacggagctcga
agcaaagctaaagtcatcaccacgactggagcagtgccaggcaagcccaccatgatgatc
agcaccacaatgggcaacacagcactgacgcagtggcagccgcctaaggaaatggtgggg
gagctgatgggctaccagctgcagtacaagcgcactgatgaagaaacctacacctcacgc
gagctgagaaagactgacgaccattacactgtcactgggctgcacagaggcgccacctac
gtcttccgcctcagtgcccgtaatcgtgcaggcctcggcgaggcctacgtaaaggagatt
agcacccctgaagacgtaccctcaggtttcccgttcaaccttcaagtcacagggctgacc
cagtccagcacccagctgacttgggagcccccactgcaagccgaaaggaacgggaagatt
gcatactacatggttgtgtacagggacatcaacagtcagcagaacagcaccaaccgcacg
gcagacacgcatatgactatccagggccttaatcctgacaccacctatgacatccgggtg
caggcgttcaccagtaagggcgggggacccctcagccccagcattcagagcaggaccatg
tccaatgattttcccaccttgaactttggtgtcaaagctgtcatgaaaacatctgtcctc
ctcacctgggatttgccaccaaactacaaatcccaagtgcctttcaagatcttgtacaac
cagcaaagtgtggaagtgcagggaaatctgaagaggaagctgatcgcgcagctgcagcca
gacacagattactcttttgtgctgacaagcaggggcaacattgctgggggtctgcagcag
caggtgtccatccgcactgcccctgacctgatcaagactaagcccagcacacatcaggcg
cagggtggtaaaatgaccatcaacctgcctaaggtcttgactaccacacgtgtcaggtgg
tattacattgtagtggtgccggtgtcccagtcaacgcgccggtggaagaatccagacgag
atggacctggatgagctgctgaagtcaagtgaaggcccttccctgaggcgccgacgtcac
ctggattcttccaagcctcacattgctgccaagttggcctcactgccggccaccttcacc
gtgggtgatgagaagaggtacaacggcttctacaacaagcccctgaccagtccgcaggag
tatctctgctttgtcctggccgtgcttcgatacgaagggacagacagctctgctaattat
atgacattctcagccagtccatactcagacccaatccaggtcacaacaaatatggctcag
ggaatggagcaacccgaaatgttgtgggtaatgggcccagtgctggctgtggtcctaatc
atcatcatcgtcatcgctatcctgctctttaagaacagcaaacaggaaaggaaacgggcg
tcacccctacccaaagatgagcactccggtggagtgaaagactctctgctggccaactcc
tctgaccctgttgagatgagaagactcaactaccagaccccaggtcccagctctcatcgc
tgccccaacactccaagaatgagggagcacccacccattcctgtcattgacctggctgac
cacatagagcgactgaaggcaaacgacggcctccgattttcccaggagtatgagtctatt
gatccaggccagcagtttacctgggagaactccaacatggaagtcaacaagccaaagaat
cgctatgcaaacgtcattgcctatgaccactccagggtggtgctcacctctgttgatgcc
gttccaggcagtgactacatcaatgccaactacattgacggctacagaaagcagaatgcc
tacattgctacacagggcccactgccagagacactaagcgatttctggaggatggtgtgg
gagcaaagatccaacaccatcatcatgatgaccagactggaggagaagtcacgggtgaag
tgtgaccagtactggccatcgcgaggaacagagacttatggaatgatccaggtcaccatg
ctggacactgtggagttggccacttacagcgttcgtacttttgccctctacaagaatggc
tccagtgagaagagagagatgagacagttccaattcatggcctggccagaccatggggtg
ccagagtaccctacccccatcctggccttcctacggcgggtaaaggcctgcaatcctcca
gatgcagggcccatggtggtccactgcagtgcgggcgttggcaggactggctgcttcatc
gtgattgatgccatgctggagcgcatgaaacacgagaagtctgtagatatctacggccat
gtgacgtgcatgcgtgcccagaggaactacatggtccagactgaggaccagtacattttt
atccatgaagcactcttggaggccgctacctgcggcaacactgaggttccagcacgcaac
ctgtttgcccacatccagaaactcacccagcccccacccggcgagacagttactgccatg
gagttggagttcaagagactggccaactccaaagcccacacgtcacgcttcataagcgcc
aacttgccctgcaacaagttcaagaaccgtctggtcaacatcatgccttttgagtccacc
cgtgtctgcttgcagcccatccgtggtgttgagggctctgactacatcaatgccagctgc
attgacggctacagacagcagaaggcctacctggccacacagggccccctggcagagacc
accgaggacttctggaggatgctgtgggagcacaactccaccatcgtcgtcatgcttact
aagctacgagagatgggacgggagaagtgtcatcagtactggccagcagagcgttcagcc
aggtaccaatactttgtggtggatccaatggctgagtacaacatgccccagtacatcctc
agagagttcaaagtcacagatgccagggacgggcagtcgagaacaatccgccaattccag
ttcactgactggcccgagcaaggagtgccaaaaactggagaaggcttcattgatttcatt
ggacaagtgcacaaaaccaaggaacagtttggacaggatggaccaatcactatacactgc
agtgccggggtgggcaggaccggagtcttcatcactctcagcatcgtgctggagaggatg
aggtacgaaggagtagtcgacctcttccagacagtgaagacacttcgcacccagcgacct
gccatggtgcagaccgaggaccagtaccagttgtgctacagggcagcattggagtacctg
ggaagctttgaccactatgcaacataa
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integrated database retrieval system
