Etheostoma cragini (Arkansas darter): 117955249
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Entry
117955249 CDS
T07493
Name
(RefSeq) LOW QUALITY PROTEIN: collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117955249
Peptidases and inhibitors [BR:
ecra01002
]
Metallo peptidases
Family M10
117955249
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_5
Reprolysin_4
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
117955249
NCBI-ProteinID:
XP_034745473
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Position
13:complement(6108403..6113651)
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AA seq
479 aa
AA seq
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MRSCSLCIILSLAVAVYCVPVTQVTDQDVHDAESYLKNFFNLTEETGPTSRQGISQVSRK
LSEMQRFFGLQITGTLDADTMAVMKKPRCGVPDTNIARFSTFGRNYKWQKNSLTYRIVNY
TPDMSVAEIDDSMEKALQVWAKVTPLRFTRINSGTADIMISFGRRTHGDYYPFDGPSGTL
AHAFAPSSGIGGDAHFDDDEKFTFRSNRGYVLFMVAAHEFGHSLGLSHSNDPGALMYPVY
SYRNPDTFVLPRDDVNGIQSLYGXYXLAGSSGPGPSVAKLQPPTTPDVCDSTMVLDAVTT
LRGEMLFFKDSFFWRSSPQSNTPQLSLITSFWPNAPPNIDAAYESQQSDRVFLFKDNKVW
AFAGFDLVSGYPKTLSSFGLRKSVKKIDAALYDAESGKTLFFVGSSYYSYDEAKKTMDQG
FPKRVHQTFSGLNSKVTAAFQVNGFTYIYSGPYMYEYSLRTGRLHRVLRNSHFLRCTNV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttgcagtctgtgcatcatcctgagcctggcggtggcagtttactgcgtgccg
gtaacacaagtcactgatcaagatgtacatgatgcagagagctacctaaagaacttcttc
aacctaacagaggagacgggtccaactagcagacaggggatcagccaggtgagcaggaag
ctgagtgagatgcagagattcttcggcctccagatcaccgggacgctggatgccgacacc
atggcggtgatgaagaagccccgctgtggcgtcccagacaccaacattgcaaggttctcc
acgtttggaagaaactacaagtggcaaaaaaacagccttacctacaggatagtgaactac
acacctgacatgtctgtggcagagatagatgactccatggagaaagctctgcaggtttgg
gccaaagtcactcctctgagattcacaagaatcaacagtggaaccgctgacatcatgatc
tcctttggccgccgaactcatggggattattacccctttgatggccctagtggcactctt
gcccatgccttcgccccatcctctggcattggaggagacgctcatttcgatgacgatgag
aagttcactttccgctccaacagaggctatgtcctcttcatggtggctgcccatgagttt
ggccactccctgggtttgtctcactctaatgatcctggtgctctcatgtaccctgtgtac
tcatacagaaacccagacacctttgttctgccccgggatgatgtcaacggcatccagtct
ctctatggttagtactaactggctggatcatctgggcctggcccctctgtggctaaactt
cagccccccaccacccctgatgtctgtgattcaaccatggtcctggatgctgtcactacc
ctgcggggagagatgctcttcttcaaggacagcttcttctggcggagctcccctcagagc
aatacaccccagctaagtctcatcacaagcttctggcccaatgccccccccaacatcgac
gctgcttatgaaagccaacagtcagacagagtctttctctttaaagataataaagtgtgg
gcctttgctggctttgatcttgtgagtggctatcccaaaacactttccagttttggtctg
cgcaaaagtgtgaagaaaatcgacgcggccctctatgacgctgaatccggcaagactctg
ttctttgtaggcagctcttactacagttatgatgaggccaagaagaccatggaccaagga
tttcccaagcgagtgcatcagacattctcgggcctgaacagcaaggtgactgctgctttc
caagtcaatggttttacttacatctacagcggaccgtacatgtatgagtacagcctgagg
accgggaggttgcaccgtgtgctgaggaacagccacttcctgcgctgcactaatgtctag
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