Etheostoma cragini (Arkansas darter): 117957643
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Entry
117957643 CDS
T07493
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
ecra04510
Focal adhesion
ecra04540
Gap junction
ecra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117957643 (pdgfab)
04020 Calcium signaling pathway
117957643 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117957643 (pdgfab)
04540 Gap junction
117957643 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117957643 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecra04052
]
117957643 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117957643 (pdgfab)
Cytokines and neuropeptides [BR:
ecra04052
]
Cytokines
Growth factors (RTK binding)
117957643 (pdgfab)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117957643 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
117957643
NCBI-ProteinID:
XP_034749415
LinkDB
All DBs
Position
15:complement(9127689..9147807)
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AA seq
228 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLDIDSVGTGNNVI
EEPKHHKHHNHHKNYSRQHGYYNDLKSSQLHSRRKRSIVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVMRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAETGHHRAKGKKRKPKKLRPSKDLLAT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacttcctgctgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactagacattgactccgtaggtacgggaaacaatgttatt
gaggagcccaaacaccacaagcaccacaaccaccataagaactactcccgccagcatggt
tactacaatgacctgaagagttcccagctccacagccgacgcaagaggagcattgtagag
gaggcggtcccagcggtgtgtaagacgcggacggtgatctacgagattcccaggagccag
gtggatcccacgtctgccaacttcttgatatggccgccatgtgtcgaggtgatgcgctgc
acaggctgctgcaacacaagcaacatgcgctgtcacccttcccgcaagcaccaccgcacc
gttaaggtagcaaaggtggagtacgtaaggaggagacccaagctgaaggaggtctttgtg
cgattagaagaccacctggagtgtgtgtgcacatcacagcatcacgtggtggagcactca
gatgcagaaacaggccaccatagggctaaaggtaaaaaaaggaaacctaaaaagctaagg
cccagcaaggatttattggcgacataa
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