Etheostoma cragini (Arkansas darter): 117958649
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Entry
117958649 CDS
T07493
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03420
Nucleotide excision repair
ecra04110
Cell cycle
ecra04114
Oocyte meiosis
ecra04120
Ubiquitin mediated proteolysis
ecra04141
Protein processing in endoplasmic reticulum
ecra04310
Wnt signaling pathway
ecra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117958649 (rbx1)
04120 Ubiquitin mediated proteolysis
117958649 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
117958649 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117958649 (rbx1)
04350 TGF-beta signaling pathway
117958649 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117958649 (rbx1)
04114 Oocyte meiosis
117958649 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117958649 (rbx1)
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117958649 (rbx1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
117958649 (rbx1)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117958649 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
117958649 (rbx1)
Cul2 complex
117958649 (rbx1)
Cul3 complex
117958649 (rbx1)
Cul4 complex
117958649 (rbx1)
Cul7 complex
117958649 (rbx1)
Cul8 complex
117958649 (rbx1)
Cul9 complex
117958649 (rbx1)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117958649 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
117958649 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
117958649
NCBI-ProteinID:
XP_034751049
LinkDB
All DBs
Position
15:3504997..3507982
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctatggatgtagatacgccaagcggcacaaacagtggagccagcaaaaag
cgatttgaagtaaagaagtggaatgctgtggcactgtgggcctgggacattgtggtggat
aactgtgccatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaaccatgccttccat
ttccactgtatttcccgctggctgaaaaccagacaggtttgccctctggacaacagggag
tgggagtttcagaaatacggacactag
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