KEGG   Etheostoma cragini (Arkansas darter): 117958649
Entry
117958649         CDS       T07493                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03420  Nucleotide excision repair
ecra04110  Cell cycle
ecra04114  Oocyte meiosis
ecra04120  Ubiquitin mediated proteolysis
ecra04141  Protein processing in endoplasmic reticulum
ecra04310  Wnt signaling pathway
ecra04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117958649 (rbx1)
   04120 Ubiquitin mediated proteolysis
    117958649 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117958649 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117958649 (rbx1)
   04350 TGF-beta signaling pathway
    117958649 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117958649 (rbx1)
   04114 Oocyte meiosis
    117958649 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecra04121]
    117958649 (rbx1)
   03400 DNA repair and recombination proteins [BR:ecra03400]
    117958649 (rbx1)
Enzymes [BR:ecra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     117958649 (rbx1)
Ubiquitin system [BR:ecra04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   117958649 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     117958649 (rbx1)
   Cul2 complex
     117958649 (rbx1)
   Cul3 complex
     117958649 (rbx1)
   Cul4 complex
     117958649 (rbx1)
   Cul7 complex
     117958649 (rbx1)
   Cul8 complex
     117958649 (rbx1)
   Cul9 complex
     117958649 (rbx1)
DNA repair and recombination proteins [BR:ecra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117958649 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117958649 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 117958649
NCBI-ProteinID: XP_034751049
LinkDB
Position
15:3504997..3507982
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccaagcggcacaaacagtggagccagcaaaaag
cgatttgaagtaaagaagtggaatgctgtggcactgtgggcctgggacattgtggtggat
aactgtgccatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaaccatgccttccat
ttccactgtatttcccgctggctgaaaaccagacaggtttgccctctggacaacagggag
tgggagtttcagaaatacggacactag

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