Etheostoma cragini (Arkansas darter): 117959162
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Entry
117959162 CDS
T07493
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117959162 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117959162 (nthl1)
Enzymes [BR:
ecra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117959162 (nthl1)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117959162 (nthl1)
Prokaryotic type
117959162 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RPA_interact_N
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
117959162
NCBI-ProteinID:
XP_034752044
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All DBs
Position
2:22958959..22961805
Genome browser
AA seq
408 aa
AA seq
DB search
MIRVRCSTRGYVVQCFTMTSPYFMQRSVIARSGGPNAGCVPADSLRSKLTKRKVDPVSSV
SVKVEEEEARIFEQRPSSAPLLTGNCHPKTEPDTLPLSSHSRRRKQLKVEYDKDESVTPV
KIEPPDWKQQLECIREMRSSRDAPVDNMGAKTCCDTEAPAHVRRFQVLVSLMLSSQTKDQ
VTAAAMQKLRAHGCTVENILTTDDEALGKLIHPVGFWRTKVKYLKLTSAMLQKEFGGDIP
DSVEGLVRLPGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISNRLGWLEKPTKNPEETRKA
LEEWLPRELWSEINWLLVGFGQQVCLPVNPLCSVCLNQHSCPSAHKISTTKRPKAGSPRS
PNPTSSFTTKIEPEQESAVKHGRTKKEPLPTPVSPNAQRGRLKSKVKH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgtccgctgcagcacgaggggctatgtagtccagtgttttaccatgacttct
ccttatttcatgcagaggtctgttatcgcacggagtggtggtccgaatgctggctgtgta
cctgcggactctcttaggtccaaacttaccaaaagaaaggtggacccagtttcctctgtg
tccgtgaaggtggaggaggaggaagcgaggatctttgagcaaagaccctcctcagccccc
ttattaacgggcaattgccatcccaaaacagaaccggacactttaccgttgtcttcacac
agccgcaggaggaaacagctaaaagtggaatatgacaaggatgaaagtgttacacctgtg
aagatagaacctcccgactggaagcaacagttagaatgcatccgtgaaatgaggagcagc
cgggatgcacctgtagataacatgggagccaaaacatgctgtgacacagaggctcctgcg
catgtgagacgtttccaggtgttggtttcactcatgctgtccagtcagaccaaggaccag
gtgacagcagcagccatgcagaagctccgagctcacggctgcactgtagaaaatatactc
actactgatgatgaagcactgggaaaactcatccaccctgtcggtttctggaggactaag
gtgaagtatctaaaactgacatcggccatgctgcagaaagaattcggaggggacatccca
gatagtgtggaggggctggttcgtcttccaggagttggacctaagatggctcacttggct
atggacatcgcctgggaccaagtgtccggcattggagtggacacacatgtgcatcgtatc
tccaatcggctcggctggctcgagaaaccaaccaagaacccggaagaaacacgcaaggcc
ctggaggagtggttacccagggagctgtggagtgagatcaactggcttctcgtgggtttt
ggacagcaggtttgtctccctgtcaaccctctctgctctgtgtgtctgaaccagcacagc
tgtccatccgcccacaaaatctctacaacaaagaggcctaaagctggatccccgcggtct
ccaaatccaacctcttcctttacaaccaaaattgaaccagaacaagaatctgctgttaaa
cacgggaggacaaagaaggagccactgcccacgcctgtttcccccaacgcacagagagga
aggctaaaaagcaaggtcaaacattga
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