Etheostoma cragini (Arkansas darter): 117959978
Help
Entry
117959978 CDS
T07493
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04217
Necroptosis
ecra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117959978 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117959978 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117959978 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117959978 (tnfaip3)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117959978 (tnfaip3)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C64
117959978 (tnfaip3)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
117959978 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
117959978
NCBI-ProteinID:
XP_034753276
LinkDB
All DBs
Position
17:6370276..6380462
Genome browser
AA seq
829 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAATSGLMHHLRGTHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELLQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQQQ
KERLLKDYLLLIEIPVIGLGYDATRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVETQPHCHECFEKRQATTGGGM
RIEGVVQTKGGGVQGGVGVVGGSETEVSSRGARSSSPPSSSSGRVVVISSPRSAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNHGPPGAGTAAPGLPGPNGGAPV
PHPAQGSGWTQWGGCETETERCSMCRQEAFRIFNGLCPPCMQRSQPPERGEPQQNNPRTE
ATSSAWTQARDTERPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQ
TNHHLTPPPAPVQSRHGVEAGFQNTSRCRGPGCGAVGKAMLEGYCDKCYVKEQSTRLNQV
AHRTPHSPPLVMRDRAAKPRSSQQSQTQTQTQTQTQCRRSGCSNVSPGCTDLCPECHTRG
QGREAGRRAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaatttctgtttgtctccaacctgctgaaggcc
gtgaagatccgtcaaagagtgcccaacgacgtggtgaagccggctgccaccagtggtctg
atgcaccacctgcggggtacgcaccgttacacgctggagatgatagccatgaaccacttc
ccacaggccttcagggaggttgtgcaggccgccatcctggaccgagccatgcaggcctct
ttggagcaggagaagaagctcaactggtgtcgggaagtaaagaaaatggtccccttacgc
accaatggagatggaaactgtttgctccacgcggcctctcagtacatgctgggcgttcag
gacacagacctggtacttcggaaagccctccatggtgttttgaaagagacagacactggc
gtctttagagctcgctttcaggcagagctcctccagtcccaggagttcacccagaccgga
ctccgatacaccaccatgaactgggaggaggagtgggaaaagattgtgaagatggcgtcc
ccggtctccagtagtaacggcctccagtttgactctctggaagacattcacattttcgtc
ctctccaacattctccgcagacccatcattgtcatcgcagaccaggtggtcaggagtatg
aaatctggctcctccatctcacctctgaatgtgggtgggatttatctgccgctacactgg
ccgcccacagaatgctacaaatacccaatagtgctaggctacgactcgcagcactttgca
cccctcatcaccatcaaagacagtggtccagaaatccgagcagtaccgctgataaaccca
ggacgagggggctttgaggagctgaaggttcactttttaatggagaaagaacagcaacag
aaagagaggcttctcaaagactacctgctattgatagagatccctgtcataggcttaggc
tacgacgccacacggatcatcaatgctgcacggctagatgagggcaaccttcccgaagac
atgaacctgatggaggactacctgcagcttgtcaaccatgagtaccagcgctggcaggag
gacaaggagcaggcatgggctgcccagccgcagcgcccaccacccttctccgtctcccag
ctctctctcatcgagatccgttgtgccacaccacgatgcaccttctatgtttctgtggaa
acccagcctcattgccatgaatgctttgagaagcgacaggccactactggtggaggaatg
aggatagaaggggtggtgcagaccaagggaggaggggtgcaaggtggggtaggagtggta
gggggatcagagactgaggttagctccagaggagcccgaagcagcagtcccccatcctcc
tcgtctgggagagtggtggtgatttccagccctcgctcagccccacccaccgcacccagc
ctcagcctgtacagtgaaactcatgccatgaagtgcaagacacccggctgcctcttcacc
ttaagtgtggagcatgatggactttgcgagcgctgctttaactccaggcaaaaccatgga
ccccctggagctggaacagctgctccaggactcccaggccccaatgggggggctccagtc
ccacacccagcccagggctctggctggacgcagtggggtggctgcgaaacagagacagag
cgctgcagtatgtgcagacaggaggcgttcaggatattcaatggcctgtgcccaccctgc
atgcagcgatcgcagcctccagagaggggagagccacagcagaacaaccccaggactgag
gctacgtcttcagcttggacccaggcccgggacactgagcggccgtgcctcaccctaacc
ccagggcacacctcagcctggcaagcccctttggcccggccttgtaaaagatctgggtgc
cagttctttgggacgccagagaagttgggtttctgcactatttgctacgtagactatcag
accaaccaccacctgacccctccccctgccccagtccagagccggcatggtgttgaggca
ggttttcagaacacctcccggtgtcgtgggcctgggtgtggtgcagttggcaaggcaatg
ttggagggctactgcgacaagtgctacgtcaaagagcaaagcacacggctcaaccaagtt
gcacatcgcacaccacactcccctcctctggtcatgcgtgaccgagcagccaaacccaga
tcttcgcagcaatcccagacacagacccaaactcagactcagactcagtgccggcggagt
ggatgcagtaatgtgtccccgggttgcacagacctctgcccagagtgccacacacgtggc
cagggcagagaggcaggcagaagggcacaggcacctaaggaaaagtccaagcagcgttgc
aggacgcagggctgtgaccactacgccaaccaagagaaacagggctactgcaacgagtgt
gatcacttcaaacagatctaccgcggctga
DBGET
integrated database retrieval system
