Etheostoma cragini (Arkansas darter): 117960263
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Entry
117960263 CDS
T07493
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04060
Cytokine-cytokine receptor interaction
ecra04672
Intestinal immune network for IgA production
ecra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117960263 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117960263 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117960263 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecra04052
]
117960263 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117960263 (cxcl12a)
Cytokines and neuropeptides [BR:
ecra04052
]
Cytokines
Chemokines
117960263 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Chemokines
117960263 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
117960263
NCBI-ProteinID:
XP_034753932
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Position
17:complement(12686441..12695369)
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AA seq
98 aa
AA seq
DB search
MDMKLLAVVAALTVVIYAPPTQAKPISLVERCYCRSTVNNLPRGYIRELRFIHTPNCPFQ
VIAKLKSNKEVCVNPEIRWLQHYLKNALNKLKKSKQDN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagctgttggccgtcgtagctgcgctcacggtggtgatctatgcgcctcca
acacaagcaaagcccatcagtctggtggagagatgctactgtcgttcaacagtcaacaac
ctcccacgaggctacattcgagagctcaggttcatccacacacccaactgtcccttccaa
gtgattgccaagctgaagagtaacaaagaagtgtgtgtgaacccagagatccggtggctg
cagcactacctgaagaacgccctcaacaaattgaagaaatccaagcaggacaactaa
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