Etheostoma cragini (Arkansas darter): 117960498
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Entry
117960498 CDS
T07493
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117960498
Membrane trafficking [BR:
ecra04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117960498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
117960498
NCBI-ProteinID:
XP_034754327
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All DBs
Position
17:12312238..12317364
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AA seq
937 aa
AA seq
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MARLVLEQLSDFGDYTGGKELTEIFKLTNNELKSSPSNVRLSPDGRHVHVILRKPKVGLV
TFDKYERPQLAQNQKKLDLRLTQTVPIVDILYLDHNKSSSSSRDPAALAVVYENGKVEFW
KFQEYKAGWHLLQTSDLCNSPRARVVSVCACSNLIIWCEERPPSESTPALSSTKNKLRYC
VCRRDFEVEEGAVSLGGVKIALHNNPKFTVVSSGEYVHLLPEVKVKPLMSISKCFLSWSP
HNDSFTVSTTCKNNPLKKLSAKESDLKRLVTDCLGYLSTLEPPEIYDFSPTACGGLLLLL
STGWVCLLQKDGMLRQVYKLADNCLVKCGSHTSLCMYQDTLALLIGQNLHLIDVNCGREM
EKIMLKKDGLLYVNQAERCAPHLLLETGLFVVVNREMDSRESNSKLKHSGLSAVECIHPG
ALLVEAVFEEACKYYQQRSLSSTQLTVDALKKGGRFQAPTSLASIVRNYLGKGLRRNGAE
PAQDRGGECTAAQDKLMGSLEAELKALVALEEVKGSLVRGSDKEVEAVCESLVEKEVARL
LSVSELDKEALLYLNSIFSSFPRQVWRAAQAALQLHHNGEGSLSSRAPPDVWKTVLSPAM
TPSTPSCLTYTNGGPKHNHSLKGDHAANCKDKATSSTYPAALPVFELLCRSMFHFQPSWL
PRFLELAQQQQGSAGLCLSLSSSSWGFSGGKGVEGRENNVPLYKRALCVLSGLTSDRDQL
QDLEVELLLVSGRPNAILQALRILMAKQQWERVTQVAQKFCKQSPLLNKEIFTTLLCEVA
QHRDLDPYLDLLWTLCPEDLTVTTILNLVLKNLPSPNTPPSSSSSSSSFSMSSSSPAPFA
DSNSSQLTIGLLKPLLRKVLQRETKPSQRYADILQSPSYPPPAPPRRPVEQPRTAPDPST
DSSGINIALTSFAATPEQQSSTTTVQRARVALPANPV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtttggtgttggagcaactgtcagattttggggactatactggcggtaaagag
ctgactgagatctttaaactgactaataacgagctcaaaagcagtccgtcgaacgttcgc
ctgagcccagatggacgtcatgttcatgtcatcctgcgcaagcctaaggtcggtcttgtg
acttttgacaaatatgaaagaccccagctggcccagaaccagaagaagctggatttgcgt
ttaacacaaaccgtgcctattgttgatattttatatttggaccataataaaagcagcagt
agcagcagagaccccgcagccttagcagtggtttatgaaaatggaaaagtggagttttgg
aaattccaggaatacaaagctggctggcatctcctgcaaacatcggatctgtgtaacagc
cccagagcaagagtggtgtctgtctgtgcctgttccaatcttatcatctggtgtgaggag
aggccgccctcagaaagcacccctgccctcagctccacaaagaataagttgagatactgt
gtttgcagacgtgacttcgaggtggaggagggggctgtcagcttgggaggagtgaaaatt
gccctccacaacaatcctaaattcactgtggtcagctcaggtgaatacgtacatcttctt
cctgaagtgaaagtcaagccgctgatgagtatctccaaatgttttctctcctggtcccct
cacaatgactccttcacagtcagcaccacatgtaaaaacaatcccctaaaaaaactttca
gccaaagagtctgatttaaagaggttggtgacggactgtttgggatatttatcaactctt
gaaccacctgagatctacgacttctctcctacagcctgtggaggcctgctgctgctgctc
agcacagggtgggtgtgtcttctgcagaaagacgggatgttgcggcaggtatacaaactg
gcagacaactgcttggtaaaatgtggttctcacactagcctctgcatgtaccaggacacc
ctggcgctgctgatagggcaaaacctgcatctgatagatgtgaactgtggcagagagatg
gaaaagatcatgctgaagaaagatgggttattgtatgtaaatcaggctgaaagatgtgca
cctcacttgctcttagaaactggactttttgtggttgtgaacagggagatggactctaga
gagagcaactctaagctgaagcattctggtctcagtgcagtggagtgtattcatcctgga
gccctcctggtagaagcggtctttgaggaggcctgtaaatactaccagcagagaagcctg
agcagcacccagctcactgtggacgcgctgaagaaaggaggtcggtttcaggctcccacc
tctttagcatccatcgtcaggaactacctcggcaaagggttgaggcggaatggagccgag
ccggcccaggaccgtggaggtgaatgcacagcagcacaagacaaactgatgggctcactg
gaggctgagctcaaggctctggtcgctctggaggaggtgaaggggagtttagtcaggggg
agtgataaagaggtggaggcagtgtgtgagagtctagttgagaaagaagtagccaggttg
ctttcagtctcggagctggataaagaggctctgctttacctcaactccatcttcagcagc
tttccccgccaggtgtggagagcggcgcaggccgcccttcagctacaccacaacggggag
ggctctctgtccagcagggctcccccagacgtgtggaaaactgtcctcagccctgctatg
acacccagcaccccgtcctgcctcacgtacacaaacggcgggccaaaacacaatcatagc
ctcaaaggtgatcatgctgccaactgtaaagacaaagctaccagctccacttacccagct
gccctgcctgtgtttgagctcctctgccgctcaatgttccacttccagcccagctggttg
ccccggttcctcgagctggcccagcagcagcagggctcagccggcctgtgcctgagcctg
tcctcttcctcttggggcttctccggtgggaaaggagtggagggccgggagaacaacgtg
ccgctctacaaacgagccctgtgcgtcttgtccgggctgacctcagacagagaccagctg
caggacttggaggtggaactgctgctggtcagtgggcggcctaatgccatcctgcaggcg
ctgaggatcctcatggccaagcagcagtgggagcgagtcacccaggtggcccagaagttc
tgcaaacagagtccgctgctcaacaaggagattttcaccactctgctgtgcgaggtggcc
cagcacagagacctggacccctatttggacctgctgtggaccctgtgccctgaggacctt
actgtcaccactattcttaacctagtgcttaaaaacctcccctcccctaacaccccccca
tcatcctcctcctcttcctcttcattctccatgtccagctcatcccctgctccctttgca
gactccaacagcagccagttgaccatcgggctgttgaaacctctgctgagaaaagtgctt
cagagggagaccaagcccagccagcgctatgcagacatcctccagtcaccatcatacccc
cctcctgcacctcctcgcaggcctgtagagcagcccaggacagccccagatcccagcaca
gactcatctggcattaacatcgccctgacttctttcgcggcaacacccgaacagcagtcg
tccacaaccactgtccaaagagccagggtggcgctgcccgctaacccagtctga
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