Etheostoma cragini (Arkansas darter): 117960581
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Entry
117960581 CDS
T07493
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117960581 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117960581 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117960581 (ltbp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
117960581
NCBI-ProteinID:
XP_034754451
LinkDB
All DBs
Position
17:25664830..25759515
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AA seq
1206 aa
AA seq
DB search
MRKTADLTVVHKTIHVGNHTGRIKVVFTPTICKVTCTGGRCQNNCELGNTTTIISENGRA
TDTLTAPNFRVVVCHLPCMNGGKCSTRDKCQCPPDFTGKFCQLAVVNGQQQPSMGYSQTQ
VHSTHTLPLTYSNGHNPVFSPSIVNIHIKHPPEASVQVHQVSQLDNYHNIGHQLKASQAG
SSSSTSYTYQHSESSQKIQQHGYNMLYPSQHGYQPISSKNTLGRCFQETAGSQCGKALPG
LTKLEQCCGTIGTSWGFHKCQKCPKKQSIPLIDCPQGYTRINSSHCQDFDECQLQGACPN
GNCLNTVGSYRCMCKPGFVPDPTLTTCISNTPATQEEKGACFRLVSSGRQCLHPVSTQLS
KQLCCCSVGKAWGPRCDKCPPQGTAKFKDICPGGMGYTVLPNPPVNKPVTIHQAPIEPLP
LQPLPTPERPVEAFGKPEESVPVATAAPDEELVVPVVSDRPVVEPILPQLSPGVSTVKIE
AAYPEVVERSSPPEPVEILPSNAGQDIAPTQSAEVDECQINPYICGQGICYNTAEGYTCH
CDDGYHPDDTRSTCEDVDECLESPSLCYGGRCKNTEGSFRCVCAQGFLLDEEGTTCVDVD
ECLDEQICTRGHCQNTDGSFLCQCGPGFTLSLAGDRCDDVDECVEEPRPCEAVGQCVNIM
GSYSCSCPQGYRQINGTRCTDVDECVDEAELCSPHGECLNTDGSYLCVCEMGFTANLDTP
SCDDIDECGLNETLCGPHGYCENRLGSFRCLCDQGYHESLDGQACVDVNECELLGSVCGE
AQCVNADGSFLCVCPSGQDYNVMIAKCEPIPTVSSVEHKECYYRLNNENLCESVLTSHVT
LQECCCTLGAGWGDNCEVYPCPVNGTDQFDQMCPSGRGFIPNGDFLYGVATADSYKDADE
CTLFGQEVCKGGFCLDTVGSYECYCKTGQDYDAANLQCTDMDECLDESLCAGGQCMNTDG
SYMCFCTQPMVLEPSSNRCVFIPEVAEQHEAEQTDNQGICWQTVTQSMRCMRPLGPDRKT
TYTECCCLYGEAWGMDCALCPYRNTEDYASMCNLGGRRAYGHDALVAGPIHEYEVSQDYS
PLPGPVLPFYDNEEPPFKAFEGLRAEECGILNGCENGRCVRVQEGYTCDCFDGYTLDLSR
MACIDVNECSELNTRMSLCKNAQCINTVGSYQCVCLPGFFASDKPNYCVAPATHQTATHT
GSIDRH
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagactgctgacctgacagttgttcacaaaaccatccatgtgggcaaccataca
ggacggatcaaggtggtgttcactccaaccatctgcaaggtaacctgcacgggggggcga
tgtcagaacaactgtgagctgggaaacaccaccaccatcatcagcgagaacggccgcgct
actgacaccctgacagcccccaacttcagagtagtggtgtgtcacctcccgtgtatgaat
ggcgggaagtgcagcaccagggacaagtgtcagtgcccccccgattttactggaaagttc
tgccagttggctgttgtgaacggacagcagcagccatcaatgggctacagccagactcag
gtccactccacacacaccctacctctgacctacagcaacggccacaatcccgtgttcagc
cccagcattgtcaacatccacattaagcatccccccgaagcctcagtccaggtccaccag
gtgtcccagctggacaactaccacaacatcgggcaccagctcaaagcttcccaggcaggc
tcctcctcctctaccagctacacgtaccagcactcagagagcagccagaagatccagcag
cacggctacaacatgctttaccccagccagcacggctaccagccaatcagctccaagaac
accctgggccgctgcttccaggaaacagcagggagtcagtgtggaaaagcgctgccaggt
ctcactaagctggagcaatgctgtgggaccatcgggacgtcttggggtttccacaaatgc
cagaagtgtccaaagaaacaatctattcctctgatagattgtcctcagggttacacgaga
atcaacagctctcattgccaagatttcgatgagtgccagctgcagggggcgtgtcctaat
gggaactgtctgaacactgtgggcagctataggtgcatgtgtaaacccggatttgttcct
gaccccacactcaccacttgcatttccaacacgcctgccacccaagaggagaagggggct
tgcttccgtttggtgagctcagggaggcagtgtttgcacccagtgtctacccagctgagc
aaacagctctgctgctgcagtgttggcaaggcctggggccctcgctgtgacaaatgccct
cctcaaggaacagctaagttcaaagacatctgtcctggtggaatgggctacactgttcta
ccaaatccgcctgtcaataagccagtcaccattcaccaggcacccattgagcctctaccc
ctccaacccctgccaacaccggagagaccagtggaagcttttgggaaacccgaagagagt
gtaccagtagcaacagctgcaccagatgaggagctggtagttcctgtggttagtgatagg
ccagtagttgaacctatcctgccccagctatctccgggtgtatctactgtcaagatcgag
gcagcctacccagaggttgttgagaggagctctccacccgaaccagtggagatcctgcca
tctaatgcaggccaggacattgcccccacccagtcagctgaggtggatgagtgccagatc
aacccttatatttgtggccaggggatttgttacaacacagcagagggttacacctgccac
tgtgatgatggataccatccggatgacacccggtccacctgtgaagatgtagatgagtgt
ttggaaagcccatctttgtgctatggcggtcgctgcaagaacacagagggcagttttcgg
tgtgtgtgtgcgcagggattcctcctggatgaagaaggaaccacttgtgttgatgttgat
gagtgcctggatgagcagatctgtacccggggccactgccagaacactgacggctccttt
ttgtgtcagtgtggccccggcttcaccctgtccctggctggagaccgttgtgatgacgtg
gatgagtgtgtagaagagcccaggccctgtgaggccgtaggccagtgtgtcaacatcatg
ggctcatacagctgcagctgcccccaggggtaccggcagatcaacggcactcgctgcacc
gatgttgacgagtgtgtggatgaagcagaactctgttcgccccacggcgagtgtctcaac
acagacggatcctatctgtgtgtgtgtgagatgggattcactgcaaacctcgacacaccc
tcctgtgatgatattgatgagtgtgggctcaatgagacgctgtgtggccctcatggctac
tgtgagaacagactgggctccttccgatgcctctgtgaccagggctaccacgagtccctg
gatggccaagcctgtgtggatgtgaacgagtgtgagctgctgggcagtgtgtgtggagag
gcccagtgtgtgaacgctgatggttccttcctctgcgtgtgtcccagcggccaggactat
aacgtcatgatcgccaagtgtgaacccattcccacagtgtcatcagtggagcataaggag
tgctactatcgtctaaacaatgaaaacctgtgtgagagtgtgctgaccagccatgtcacc
ctgcaagagtgctgctgcactctgggagccggctggggggacaactgtgaggtgtacccc
tgtcctgtcaatggcacagaccagttcgatcagatgtgtccgtctggaagaggatttatt
cctaatggagacttcctgtacggtgtggccacagctgacagctacaaagatgcagatgag
tgtactctgtttggccaggaggtgtgtaaaggaggcttctgtctggacactgtgggcagc
tacgagtgttactgtaagacgggacaggactatgacgctgccaatctgcagtgcacagac
atggatgagtgtctggatgagtctctgtgtgctggtggacagtgtatgaacacagatggc
tcgtacatgtgtttctgtacccagcccatggtgctggagcccagcagtaaccgctgtgtc
ttcattcctgaggtggctgagcaacatgaggcggagcagacggacaaccaagggatttgc
tggcagacggtgacacagagcatgaggtgcatgcggccgctgggtcccgacaggaagacc
acgtacacagagtgttgctgtctgtacggcgaggcctggggcatggactgtgccctgtgc
ccctataggaacactgaggattatgcgtccatgtgtaaccttggcgggcggcgggcatat
ggtcacgacgcccttgttgctggccctatccatgaatatgaagtgagccaagactattcc
ccattacctggtcctgtcctgcctttttacgacaacgaagagcctccattcaaggccttt
gagggtttgcgagcagaggagtgtgggatactgaatggctgtgagaacggtcggtgcgtc
cgggttcaggagggttacacctgcgactgctttgatggatacaccttggacctgtcccgc
atggcctgcattgatgtgaacgagtgctcagagctaaacacccggatgtcgttgtgtaaa
aatgctcagtgcatcaacacagtgggttcctatcagtgtgtgtgtctgccaggcttcttt
gcctctgacaaacccaactactgtgtggccccagcaacacatcaaacagcaacacacaca
gggagcatagacagacactag
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