Etheostoma cragini (Arkansas darter): 117962114
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Entry
117962114 CDS
T07493
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 2 type-2
KO
K10159
toll-like receptor 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04145
Phagosome
ecra04620
Toll-like receptor signaling pathway
ecra05132
Salmonella infection
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117962114
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117962114
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117962114
09171 Infectious disease: bacterial
05132 Salmonella infection
117962114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117962114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117962114
04054 Pattern recognition receptors [BR:
ecra04054
]
117962114
04090 CD molecules [BR:
ecra04090
]
117962114
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117962114
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Phagocytosis
Toll-like receptors
117962114
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of breast milk
117962114
Pattern recognition receptors [BR:
ecra04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117962114
CD molecules [BR:
ecra04090
]
Proteins
117962114
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Hyaluronan
Cell surface receptors
117962114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
TIR_2
LRR_9
LRR_14
LRR_Zer-1
LRR_5
DUF4220
Motif
Other DBs
NCBI-GeneID:
117962114
NCBI-ProteinID:
XP_034757102
LinkDB
All DBs
Position
19:594713..605995
Genome browser
AA seq
820 aa
AA seq
DB search
MGQMTNLYFTLLFVYLCWGQRSSPDGERSSCDQCDLRLTCNCSYRGFTHVPIVTGHALTL
DLSFNDITVVTSDDLTGHRRLRVLSLHGNGVATIHPSAFDSLWSLEELDLSDNQLTALND
KWFRRLEALQKLNLLNNPYSCLGSRPVFRRLVRLRRLSLGGPALEELKRGDLSGVTELDE
LTVHGNNLTSYESGALGEVWPLGRVTLSLHGPFLTNTALASALLADVTYPETPLVLEDLH
LIGNESVQPFRESARRRVRKMAFNNLLVSDEAIVNFLVVFDGVPLTSLFMDGVTLTGEGR
WEGAKQTDLKCIDEFFVENVVVLNIFKFASLLQLGFMLKYPRKVSVINSRVYVMPCNTSH
LLSSLQYLDLSDNLLTDLTLAETMCNGDGTMKDLRVLNVSGNALKSLLTVSRQVTKLSKL
THLDISRTGYSSMPEACSWPSTLRYLNISRAKLTTITPCLPQTLEVLDLSNNDLKAILLI
MPVLRELHLSGNKLLKLPPGWLFPNLQTLTIQANTLNRFNRADLQSYRRLQDLRAGQNKF
ACSCDFVYFLQSGIKGGKDVNLADGEESYVCDSPLYLQGEPVGQVQLSIVVCQRVLFVSV
SCGVALFVGILLCVLLWRIHAFWYVKMTWAWLRAKRSSMRRGRRRRHRTGSEELLSYDAF
VSYSERDASWVENFLVPELEEPRENDEDSVDQKTVRPLTLCLHKRDFLPGHWIVDNIMSA
MERSRRTVFVLSENFVQSDWCRYELDFSHFQLFDGNAGGDEAILILLEPLSKDDIPRRFC
KLRKLMSSTTYLEWPRDEERTGEFWRSLRNALRGEDQDDD
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggacagatgaccaacctttacttcaccctcctcttcgtctacctgtgctggggtcag
aggtcaagcccagacggcgagaggtcctcctgcgatcagtgtgacctgcggctcacctgt
aactgctcctacagaggatttacccatgttcccatagtgacaggccacgccctgactctt
gatctctccttcaacgacatcaccgtagtgaccagtgacgatctgacaggacacaggaga
cttagggttctcagtctccacggtaacggagtagctacgatccatccgtcagcgtttgac
tctctgtggagtctggaggagctcgatctgtccgacaaccagctgaccgctctcaacgac
aaatggttcagaaggctagaagctctgcagaagctcaacctgctcaacaacccatatagc
tgcctcggttctcgtccagtgtttcggaggctggtgaggctgcggaggctgtcgttggga
ggtcctgctctggaggagctgaagagaggagacctatctggagtcactgagttagacgag
ctcactgtgcacggcaacaacctgacaagctacgagtccggtgctctgggggaggtttgg
ccgttaggtcgtgtcactctgagcctccatggtccgtttctaacaaacacagccttagcc
tcggctttgcttgcggatgttacgtaccctgagacgcctcttgttctggaagacctccat
ctgattgggaatgagtctgttcagcccttcagagagtcagccagaaggagagtcaggaaa
atggccttcaacaaccttttggtgtccgatgaggccatcgttaacttcctcgtggtgttt
gatggcgtgccactcacatccctcttcatggacggcgtcacgctgacaggcgagggcagg
tgggaaggagccaaacagaccgatctaaaatgcatcgacgaattcttcgtagaaaacgtc
gtggtgctgaatatctttaaatttgcctccctgctgcagctggggtttatgctgaaatac
cccaggaaggtgtctgttataaactctcgggtgtatgtgatgccctgtaacacatctcac
ctgctatcgagcctgcagtacctggacctgtcagacaacctgctgactgacctgactctg
gcggagaccatgtgcaacggggacggcacgatgaaggacctccgcgttttaaacgtcagc
gggaacgctctgaagtcgttgttgacggtgagccggcaggtaacgaagctctccaaactg
acccacctggacatcagcaggaccggatacagttccatgcccgaggcttgctcctggccc
tccaccctgcggtacctcaacatctccagggctaaactcacaaccatcaccccctgtctg
ccccaaactctggaggtgttggatctgagcaacaatgatctcaaagccatccttctgatc
atgcctgtcctgagagagcttcacctctctggaaacaagttactgaagctgcccccagga
tggctattccccaatcttcaaacactgacaatacaggcaaacaccttgaacaggttcaac
cgtgcagacctccagtcatacagacgactccaggacctccgggcgggtcagaacaaattt
gcatgctcctgtgactttgtctatttcctccaatcaggcattaaaggaggcaaagacgtg
aatttggcagatggagaggagagctacgtctgtgactcacctctctacctgcagggggaa
ccggtgggtcaagtccaactctccatagtcgtgtgccagcgggttttgtttgtgtcagtt
agctgtggggtggcgctttttgtagggattctgctgtgcgtcctgctgtggcgcatccat
gcattctggtacgtcaaaatgacgtgggcctggctaagagccaagcggagctccatgcga
cgggggcggcggcgtagacatagaacgggctcggaggagctgctgtcctatgacgccttt
gtgtcctacagtgagagagacgctagctgggtggaaaacttcttggtgcccgagctggag
gagccgagggagaacgatgaagactctgtggatcagaaaacggtccggcctctgaccctg
tgtctccacaagcgggacttccttcctggacattggattgtggacaacatcatgagtgcc
atggagcgcagccgacggaccgtcttcgtcctctcagagaattttgtccagtccgactgg
tgccgctatgagctggacttctcccacttccagcttttcgacgggaatgccggcggagac
gaggccatcttgatccttctggagccgctgtccaaggacgacatccccagacgcttctgc
aaactgcgcaaactcatgagctccaccacttacctggagtggcctcgggatgaggagagg
actggggagttctggaggagtctacgcaacgctttgagaggagaagaccaggacgatgac
tga
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