Entomospira culicis: PVA46_02575
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Entry
PVA46_02575 CDS
T08829
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ecul
Entomospira culicis
Pathway
ecul03030
DNA replication
ecul03410
Base excision repair
ecul03420
Nucleotide excision repair
ecul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVA46_02575
03410 Base excision repair
PVA46_02575
03420 Nucleotide excision repair
PVA46_02575
03430 Mismatch repair
PVA46_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecul03032
]
PVA46_02575
03400 DNA repair and recombination proteins [BR:
ecul03400
]
PVA46_02575
Enzymes [BR:
ecul01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PVA46_02575
DNA replication proteins [BR:
ecul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PVA46_02575
DNA repair and recombination proteins [BR:
ecul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PVA46_02575
NER (nucleotide excision repair)
GGR (global genome repair) factors
PVA46_02575
MMR (mismatch excision repair)
DNA ligase
PVA46_02575
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PVA46_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
RNA_ligase
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
WDI37686
LinkDB
All DBs
Position
546019..547896
Genome browser
AA seq
625 aa
AA seq
DB search
MAVERIIELEELLQSAIQSYYSEGDSSISDEEYDELMDELRSLDSTHPLLQQVGSPITRD
LDAKIVHPIPMLSSAKVKTLPDLEKWIAWLDIPEIRLVAQPKVDGLSATIKYENGQLRYI
ASRGDGVVGQDISHLAPYLQGIALEIPHKEALEIRGELYLPKNTSYDTEGRPLRNNCVGL
VNRKEVSEALRHVHFVAYALLNEEALTSQMERLAQLRAWGFAVVEERLCQSLADVSVMVE
EYLKTLRETWLYETDGLIFIVDDTALHVSIDGRKVVDRYHHYSMAMKPPAQSRTTQLVAI
EWQLSRQGLLIPVGIFDAVEMGGAKISRATLNNVENVERLRLHLGHRILLERANDVIPFV
KENLDALSVLAVDATLIPSICPSCGHRLTRSAVHLKCNNLSCPEVAIQSILYWVKKLEMK
EIGEQTIAKLYALGKIRHPSDLYRLTYDDLVSLEGFAEKRIENFLREVEVSRTMTALTFL
SILGIPLVAKKALIKLSIKSVEDFMAFTDETYVIGRNIIQWKGEEHNRELFEDLKSVLLL
TEEAVSDEVSDDKIVVVFTGKGALSRKELQAMAEGANYLVEDNISTKTTLLVTDDVEGNS
SKMKRARAKGIEIIRYEDFFARIKD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagaacgtattatcgagttggaggagttgcttcagtcggcgattcaatcgtat
tatagcgaaggagattcgtcgatctcggatgaggagtacgatgagctgatggatgagtta
cgatcgttggatagcacgcatcctttgcttcagcaagtaggttcgccgattacgcgcgac
ttggatgcgaaaattgtgcatcctatcccgatgctctcttcggcaaaggtcaagacgctt
cctgaccttgagaagtggattgcttggctggatattcccgaaatacgtttagtggcacag
cccaaagtggatgggttgtcggcgacaattaagtatgagaatggccagctacgttatatc
gcaagccgtggagatggcgttgtgggacaagatatctcgcacctagcaccctatttgcag
gggattgctttagagattccgcataaagaggcactagagattcggggggagctctatctc
cctaagaacacgagttatgatacagaaggtcgacccttacgtaataattgtgtaggattg
gttaatcgtaaagaggtctcggaggcgttgcgtcatgtccactttgtcgcttatgcgttg
ctgaatgaagaggcgttgacctcccaaatggagcgtttggcgcagttgcgtgcctgggga
tttgccgtggtggaggagcgcctctgtcaatcgcttgctgatgtttcggtgatggtcgag
gagtatcttaaaaccctgcgtgagacgtggctttatgagaccgatggcttgatctttatc
gtggatgatacggcactgcatgtgtctattgatgggcgcaaggtggtggatcgttatcat
cattatagtatggcgatgaagcctcctgcacagagtcgcaccacgcaactggtggcgatt
gagtggcagttgagccggcaagggcttttgattcccgtaggcatttttgatgccgtggag
atggggggagcgaagattagtcgggctactctgaataacgtggagaatgtagagcgcctg
cgtctccacttggggcatcgtattctcttagagcgcgccaacgatgtgattccttttgtc
aaagagaatcttgatgcgttatcggtcttagctgtagatgcgacgctcatcccatcgatt
tgccctagttgtgggcatcgtttgacgcgcagtgcggtgcatcttaaatgcaataattta
tcttgtccagaggtggcgattcagagcatcctttactgggtaaagaagttagagatgaaa
gagattggtgagcagaccatcgcgaagctttatgcattggggaagattcgccatccaagc
gatctttaccgactgacttatgatgatttagttagtttggagggattcgccgaaaaacgc
attgagaattttttgcgcgaggtagaggtttctcgtaccatgacggcattgaccttctta
tcgattttgggtatccccttggtggcgaaaaaggcccttatcaagctgagcattaagagc
gtagaggactttatggcatttactgatgagacctatgtgattggcagaaacattatccag
tggaagggcgaagagcataaccgcgagctgtttgaggatcttaaaagcgtgcttctctta
accgaagaggctgttagcgatgaagtgtctgatgataagattgtggtagtctttactggc
aagggtgcgttgtcgcgcaaggagctacaggcgatggccgaaggtgcgaactatctggtg
gaggataatattagtacgaagacgactcttttggtaaccgatgatgtggagggcaatagc
agtaagatgaagcgtgctagagctaagggcattgaaattattcggtatgaagattttttt
gcaaggataaaggactaa
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