Edaphobacter sp. 12200R-103: GWR55_02150
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Entry
GWR55_02150 CDS
T06408
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda01501
beta-Lactam resistance
eda01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR55_02150
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR55_02150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_02150
01504 Antimicrobial resistance genes [BR:
eda01504
]
GWR55_02150
Transporters [BR:
eda02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GWR55_02150
Antimicrobial resistance genes [BR:
eda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR55_02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
EamA
Motif
Other DBs
NCBI-ProteinID:
QHS50679
UniProt:
A0A6B9YM10
LinkDB
All DBs
Position
489113..492235
Genome browser
AA seq
1040 aa
AA seq
DB search
MDRSHREESEKPFWLVRFRDPIFFFLIVLAVVGIYAARQVPISVFPETNFPRVVIGIDNG
VMPVEQMQVTITKPIEDAVNSVPGLATVRSTTSRGSAEVSLFFDWNADMYRTLQLVDAAL
SKVRQTLPATAVITTNRLTFATFPILGYSLTSDRLSQTQLWELATYQLKPPINRVPGVSI
VTVQGGKVPEFHIVPNLAKMQTAGITVMDLVNAVQASNIIDSPGLYEANHQLILGLVGSQ
AHDADELGQLVVKTTAGGTPVRIADVAAIKPGVQPVYTTVTADKKLAVLLNIARQPSSNT
VAVADAVSAEMKRLEKTLPPGVELKPYYDQSELVRESIRSVRDAILIGLFLACVILFLFL
RDWTSSLVAGLVIPITVAITIVFLWMIGESFNLMTLGGLAAAIGLVIDDAIVVVENIVLH
RDHGESRAEAARLALKEILAPLVGSTITPVVVFLPLISVTGVTGSFFRALAVTMTAALLT
SLMLALTWTPALSLVLLREGKDGPAEREEHGRMMTKIFSWHKKTLSWALAHPLMLFGLCG
VLVAGTYVGYQSLGSDLLPEMDEGGFVLDYIMPAGSSLTETNRVLEHVDRILHSIPEVES
TSRRTGLQMGLAAVTEANTGDFTVKLKDKRERGIDEVIADVRAQIGKTEPELDIEIVQVL
QDMINDLSNAPEPIQIKLFASDPALLSALAPRVGDAISKIPGVVSVENGIENTISGPATN
FQVDPIVAGRMGFTTQEVAEDATSILDGVTPTDPLIANGRPYTIRVRLGDETRRSLDTIE
NTVFNSATGRLATLGALAQITHLPPQNQIRRENLQRLVVVTAQLQGSDLGSAISRVQGTV
NAMHLPPSIRVEYGGTYQEQQRSFRQLLQVLVISMALVFGVLLAEFRNFSAPIAILTSSV
LSVAGVVFALLATGISFNVASFMGLIMVVGIVAKNGILLLDADERYRKEGVSAREAMLHA
AQRRLRPILMTATAAICGMIPLAFALGAGSQMLQPLAVAVIGGLVVSMVLSLIVTPVVYY
LLTSRQHVNESEEFSTVSHN
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcgcatagagaagagagcgagaagccattctggctggtgcgcttccgggat
ccgatctttttcttccttattgttcttgcggtggtggggatctatgcagcacggcaggtt
ccgatctctgtgtttccggagacaaactttccgcgtgtcgtgattggcatcgataacggt
gtgatgccggttgagcagatgcaggtcacgattaccaagcccattgaagatgcagtcaat
tcggttccagggctggcgacggtgcgctcgacgacaagccgcggttcggcggaggtaagt
ctcttcttcgactggaacgccgatatgtatcggacgctccaattggtcgacgctgccctg
agcaaggtgcggcagacgctgcctgcgaccgccgtcattacgacgaaccgtctgaccttt
gcgacgtttccgattctggggtacagcctgacttcggatcgtctgtcgcagacacagctt
tgggaactggcgacctatcagttgaagcctccgatcaatcgggtgccgggggtgagtatt
gtgacggtgcagggcgggaaggtcccggagttccacatcgttccgaacctggcgaagatg
cagaccgcgggtattaccgtgatggatctggtcaacgcggttcaggcatcgaacatcatt
gattcgcccggcctatacgaagcgaaccatcagctgattcttgggctggtaggatcgcag
gcgcatgacgccgatgaattggggcagcttgttgtcaaaacgaccgcagggggaacgcca
gtccgcattgcagacgtagcggcgatcaagccgggggtgcagccggtctacacgaccgta
acagcggacaagaagctggcggtgttgctgaacattgcgcggcaaccttcgagcaatacg
gttgcggtcgccgatgcggtttcggcggagatgaagcggctggaaaagacattgccacca
ggggtggagcttaagccgtattacgatcagtcggagcttgttcgcgagagcattcgaagc
gtgcgggatgcaattctgatagggctttttcttgcatgcgttatcctgtttctctttttg
cgagactggacctcatccctcgttgccggccttgtcattcccattacggttgcgatcacc
atcgttttcctctggatgatcggcgagagcttcaacctgatgacgctgggtggactggcg
gcggcgatcggtctggtcatcgacgatgcgatcgtggtggtcgaaaatattgtgctccat
cgcgatcatggagaatcgcgtgcagaggcagcgcgtttggcactaaaggagatcctagcg
ccgctggtgggttctaccattacgccggtggtagtgtttctccccctgatctcggtgacg
ggagtgacggggagcttcttccgggcgcttgccgttacgatgacagcggcgttgctgacg
tcgctgatgcttgcgctgacgtggacacctgcgctgagccttgtgctgcttcgtgaaggg
aaagatggtccagcggagcgcgaagagcatggccggatgatgacgaagatattttcatgg
cataagaagactctttcgtgggcccttgcacatccgttgatgctgttcggtctttgcggc
gtcctggtggctggcacgtatgttgggtatcagtcgcttggatcggacctgctgccggag
atggacgaaggaggctttgtcctggactacatcatgccggcgggtagctcactgaccgag
acaaatcgagtgctggaacatgtggacaggattctccattcgatacccgaggtggagagc
acgtcacgccgcaccgggctgcagatgggattggccgcagtgaccgaggccaatacaggc
gactttacggttaagttgaaggataagagagagcgcgggatcgacgaggtgattgccgat
gttcgcgcgcaaatcggaaagaccgaacctgagctggatattgaaattgtccaggtgctg
caggacatgatcaacgatctttcaaacgcgccggagcctatccaaatcaagctgtttgca
agtgaccctgcactgctttccgcgcttgcaccgcgtgtgggcgatgcaatcagcaagatt
ccaggggtggtgagcgtcgagaatggcattgaaaacactatcagcgggccagcgacaaac
tttcaggtcgatccaattgttgcgggccggatgggctttaccacgcaagaggtggctgaa
gatgccacttccattctggatggtgtgaccccgactgatccgctgattgcgaacggtcga
ccatacacgattcgcgtgcggctgggagatgagacgaggagatcgttggatacgattgaa
aataccgtgttcaacagtgcgacgggaaggctggcgacgcttggagcacttgcccagatc
acgcatctacctccgcagaatcagatccgccgtgaaaacctgcagcgactggttgtagtc
acagcgcagctacagggctcggatctgggaagcgccatttccagagtgcagggcacggtg
aacgcgatgcatctgccgccaagcatccgagtagagtatggcgggacctatcaggagcaa
cagcgatctttccggcaactgctgcaggtgttggtgatctccatggcattggtatttggg
gtactgctggctgagtttcgtaatttctcagcacctattgcgattcttacgtcgtcggtg
ctctcggtggcaggtgtagtatttgctcttctggcgacaggaatatcgttcaatgtcgcc
tcatttatgggcctgatcatggtggtcgggatcgtggccaaaaacggaattctgctgctg
gatgcggacgaacgataccgcaaggaaggagtgtcggcccgtgaggcgatgcttcatgct
gcacagcgccgcttgcggccgattctgatgactgctacagcggcaatatgcggcatgatt
ccgctggcatttgcattgggagcaggatcacagatgctgcagcctctggcggtggcagtg
attggtggtctggttgtctccatggtgttgagcctgattgttacgccggtcgtgtactac
ttattgacctcgcgtcagcacgttaatgagtcggaggagttctctacggtatctcacaac
tga
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