Edaphobacter sp. 12200R-103: GWR55_06440
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Entry
GWR55_06440 CDS
T06408
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda01501
beta-Lactam resistance
eda01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR55_06440
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR55_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eda03036
]
GWR55_06440
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_06440
01504 Antimicrobial resistance genes [BR:
eda01504
]
GWR55_06440
Chromosome and associated proteins [BR:
eda03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GWR55_06440
Transporters [BR:
eda02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR55_06440
Antimicrobial resistance genes [BR:
eda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR55_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
Biotin_lipoyl
DUF6479
DUF4079
Motif
Other DBs
NCBI-ProteinID:
QHS53708
UniProt:
A0A6B9YV66
LinkDB
All DBs
Position
complement(1561853..1563079)
Genome browser
AA seq
408 aa
AA seq
DB search
MPVEQTTDSAQTDVVPAHREEASSNPPEGGPGSGKVIGILFAIALMAAIVYGVRVRSSQE
KELAKATDEAAIPTVNVTHPQTGSAAQELILPGNVQAFTETPIYSRTNGYLKKWYFDIGS
RVRKGQLLAEIETPEVDQQLQQSRAELERIEANMQLAGVTSNRWQSLLAKHAVSQQEADQ
ARSNYIAAQAAVDASKANVRRLEQLQSYEKIIAPFDGVITVRNTDIGDLITAGSGSTNPR
ELFHLAATGKLRVYASVPEIYADSIHNGDKAYLTQDSNPSVKIQGVIVRNANAIDHATRT
LNVEVDVDNHDGALLPGAYVFVHFHIPGGSNTVTIPANTLLFRSEGLRAAVVRNDHVQLT
PITIGHDYGSTLEVTSGLTESDEIVLDPSDSLTNGAPVRVNRKAKGSR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtagaacagacgacggattcggcacagacggatgtcgtcccggctcatcgcgag
gaggcttcgagtaatccgcctgaaggcggtcccggcagcggcaaggtaatcggcatttta
tttgctatagcgttgatggcggcgattgtgtatggggtccgtgtgcgctcctcgcaggag
aaggagcttgcaaaggcgaccgatgaagctgcaattcccaccgtgaatgtgacgcatcca
caaactgggtcggccgcgcaggagctgatccttccgggcaatgtgcaggcgtttaccgaa
acgccgatctattcgcgcacgaatggctacctgaagaagtggtacttcgacattggctcg
cgggtgcgtaaaggacagttgctggctgagattgaaacccctgaggtcgatcagcagctg
cagcagtcgagggccgagctggagaggattgaggccaatatgcagctggctggtgtgacg
agcaatcgttggcagagcctgctggccaaacacgctgtctcgcagcaggaggccgaccag
gcacgcagtaactacattgctgcgcaggccgccgtagatgccagcaaggcgaacgtacgg
cgcctggagcaactgcagagttatgagaagatcatcgctccgttcgatggcgtgattacc
gttcgcaatacggatataggcgacctgatcacggcaggctccggctcgacgaatcctcgc
gaactctttcatctggccgcgacaggaaagctgcgcgtgtatgcctcggtccctgagatc
tatgccgattcgattcacaacggcgataaggcatacctgacgcaggactcgaatccgagc
gtgaagattcagggtgtgattgtacggaatgcaaatgcaattgatcacgcgacccgcacg
ctgaatgtggaagtggacgtagacaatcacgatggcgcattgctgccgggagcgtacgtg
tttgtgcacttccatatacctggcggaagcaatacggttacgattcccgccaatacactg
ctgttccgctccgaagggctgcgtgcggccgtggttcgcaacgatcatgtgcagctgacg
ccgatcacgattggacacgactatggcagtacgcttgaagtgacgtcggggcttacggaa
tcggatgagatcgtgctggatccttcggattcgctgaccaatggagcgccggtgcgggtg
aaccgtaaggcgaaaggaagccgatga
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