Edaphobacter sp. 12200R-103: GWR55_06465
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Entry
GWR55_06465 CDS
T06408
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda01501
beta-Lactam resistance
eda01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR55_06465
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR55_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eda03036
]
GWR55_06465
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_06465
01504 Antimicrobial resistance genes [BR:
eda01504
]
GWR55_06465
Chromosome and associated proteins [BR:
eda03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GWR55_06465
Transporters [BR:
eda02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR55_06465
Antimicrobial resistance genes [BR:
eda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR55_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
DUF7531
Motif
Other DBs
NCBI-ProteinID:
QHS51425
UniProt:
A0A6B9YQ97
LinkDB
All DBs
Position
complement(1571825..1573000)
Genome browser
AA seq
391 aa
AA seq
DB search
MGAVAGCKKSEDGNTAEAATTPRVAVVPVMRQALTKNLTVAGEFIPFQEVELHAKVAGYI
RKINVDIGDRVRKGQVLATLEIPELTAQVSGAEAGIRHSQEEIALAKSQVARAEADHNAL
HIAAERLKQAAAARPGMIAQQEIDDAEAKDAASEAQVAVAKATVAAQQQQADVARAEHLH
YSSLASYSRITAPFDGIVTWRYADTGALIQAGTSNAGSMPVVKVAEVKVLRLRIPVPESL
AGYVREGDTADVQVQATGDHFTGKVVRTTGALDRATRSLQVEVDVPNPKSKLTPGMYADV
TLQIAGNPSALTIPVQALDQGSNGTSVLVVDGSNEVQRRAVRVGLTTPDKVQILDGVHQG
EQVIVGNLASYEPGQKVNPRASAMAGSGKEE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgggagctgttgcggggtgcaagaagagtgaagacggaaatacggcggaggcggctacg
acgccccgggttgcggttgtgccggtgatgcgccaagcgctgacgaagaacctgacggtc
gcgggcgagtttattccttttcaggaggtagaactgcacgccaaggtcgcagggtatatc
cggaagatcaatgtcgacattggcgacagggtccgcaaaggacaggtgctggcgacgctt
gaaattcccgagcttacggcgcaggtctcaggcgccgaggccgggatacggcacagccag
gaagagattgcacttgccaagagccaggtggcgcgggccgaggccgatcacaatgcgctg
catatcgctgccgaacgtctgaagcaggctgcagcggcccggccgggaatgattgcccag
caagagatcgacgatgccgaggcgaaagacgccgcatcggaggcgcaggtggccgtcgcc
aaggctaccgtggcagcccagcagcaacaggcggatgtcgccagggctgagcatctgcac
tactcatcgctcgcgagctactcgcggattacggcgccgttcgatgggattgtgacgtgg
cggtacgccgatacgggagccctgattcaggcagggacctcgaatgcaggatcgatgcct
gtggtgaaagtcgccgaagtgaaggtgctgcgcttgcgcattccggttccggagtcgctg
gcaggttatgtgcgtgagggcgacacagccgacgttcaagtgcaggcgacaggcgaccac
tttacgggcaaggtagtgcggacgacgggagcgttggaccgcgcgacgcgaagcctgcag
gtggaagtagacgtgccgaatccgaagtcgaagctgaccccggggatgtacgcagatgtg
acgctgcagattgcagggaatccgagtgcgctgacgattccggtgcaggcgctggatcaa
gggtcgaacggaacgtcggtgctggtggtcgacggaagcaatgaagtgcagcggagggcg
gtgcgagtggggctgacgactccggacaaggtacagattctggatggcgttcaccaggga
gagcaggtgattgtgggcaatctcgcctcgtatgagcctgggcagaaggtgaatccgcgg
gcgagcgccatggcgggcagcgggaaggaggagtag
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