Entamoeba dispar: EDI_112580
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Entry
EDI_112580 CDS
T01083
Name
(RefSeq) snrnp sm protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
edi
Entamoeba dispar
Pathway
edi03018
RNA degradation
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_112580
09123 Folding, sorting and degradation
03018 RNA degradation
EDI_112580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_112580
03041 Spliceosome [BR:
edi03041
]
EDI_112580
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EDI_112580
mRNA degradation factors
5'-3' decay
Lsm complex
EDI_112580
Spliceosome [BR:
edi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EDI_112580
Complex C
U2 snRNP components
EDI_112580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
5878654
NCBI-ProteinID:
XP_001733767
UniProt:
B0E5U5
LinkDB
All DBs
AA seq
99 aa
AA seq
DB search
MNLSYRNVSRIKKQNIKLNISMQKTQIEEPIDLIKLSLDDNIFIKLRGGRKLKGKLRAFD
QHLNIILTDVNETYQEKTRTFPVLYVRGDLVVLISPQKE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcgtataggaatgtctcaagaataaaaaaacaaaatataaaactaaatatt
tcaatgcaaaaaacacaaattgaagagccaattgatttaattaaattatcacttgatgat
aatatatttataaaattaagaggtggaagaaaattaaaaggaaagttaagagcatttgac
caacaccttaatattatcttaactgatgttaatgaaacatatcaagaaaaaacaagaact
tttccagtattatatgttcgtggtgatttagtagtccttatttctccacaaaaggaataa
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