Escherichia coli DH1: ECDH1ME8569_0811
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Entry
ECDH1ME8569_0811 CDS
T02102
Symbol
rumB
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
edj03009
]
ECDH1ME8569_0811 (rumB)
Enzymes [BR:
edj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
ECDH1ME8569_0811 (rumB)
Ribosome biogenesis [BR:
edj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECDH1ME8569_0811 (rumB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_ANTKMT
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
BAJ42667
LinkDB
All DBs
Position
887510..888637
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWIMQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLHEQLPQLKVITVNIQPVHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQGDV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGFRIERVQLFDMF
PHTAHYEVLTLLVKQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataatgcagccg
attccagagcaactctccgctaaaaccgccgatcttaaaaatctgctcgccgactttccg
gttgaggaatggtgcgcgccggtgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgcgatggcaca
ccagaagacctttgtgactgcccgctttatcctgcctcatttgcgcccgtttttgcggcg
ctaaaaccgtttatcgcccgagcggggttaacgccctacaacgtggcgcgtaagcgtggc
gaactgaaatacattctgctgactgaaagccagagtgatggaggcatgatgctgcgcttt
gtactgcgttctgataccaagctggcgcaactgcgtaaggcgctgccgtggttacacgaa
caactaccgcagctgaaagttattaccgtcaatattcagccggtacatatggcgattatg
gaaggggagacggagatctacctgaccgaacaacaggcactggcggagcgttttaatgac
gtaccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ttgtacgccaccgcgcgcgactgggtacgacagctgccggttaaacatatgtgggatctg
ttctgcggtgtggggggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcatcagaggccattgcctgtgcaaagcagtcagccgctgaactgggctta
acgcgtttgcaatttcaggcgctggactccactcagtttgccaccgctcagggggatgtg
ccggagctggtgctggttaacccgccgcgccgcggcattggtaaaccgctgtgtgattat
ctctcaacgatggcaccgcgttttatcatctactccagctgtaacgcccaaactatggcg
aaagatatccgcgaactgcctgggtttcgtattgaacgggtgcagcttttcgatatgttc
ccgcataccgcgcactatgaagtgctgacgctgctggtgaagcaataa
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