Enterococcus dispar: PML78_00890
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Entry
PML78_00890 CDS
T08868
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eds
Enterococcus dispar
Pathway
eds03030
DNA replication
eds03410
Base excision repair
eds03420
Nucleotide excision repair
eds03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PML78_00890 (ligA)
03410 Base excision repair
PML78_00890 (ligA)
03420 Nucleotide excision repair
PML78_00890 (ligA)
03430 Mismatch repair
PML78_00890 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eds03032
]
PML78_00890 (ligA)
03400 DNA repair and recombination proteins [BR:
eds03400
]
PML78_00890 (ligA)
Enzymes [BR:
eds01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PML78_00890 (ligA)
DNA replication proteins [BR:
eds03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PML78_00890 (ligA)
DNA repair and recombination proteins [BR:
eds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PML78_00890 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PML78_00890 (ligA)
MMR (mismatch excision repair)
DNA ligase
PML78_00890 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PML78_00890 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
BRCT_2
Zn_ribbon_NUD
5_3_exonuc
SOGA
Motif
Other DBs
NCBI-ProteinID:
WCG33272
LinkDB
All DBs
Position
206770..208803
Genome browser
AA seq
677 aa
AA seq
DB search
MDMSESMAELTKKAAALRQELNKYAYEYYVKDNPTVEDYVYDKLYHDLVAIETQYPELTT
ADSPTQRVGGQVLQGFEKVVHDVPLYSLNDVFNKEEIKAFINRVTKELGENVSYICELKI
DGLSVTLRYEEGLFVRGATRGDGTVGENITENLKTVRSIPLRLEEPLTIEVRGECFMPKK
SFVALNEKRDELGQAIFANPRNAAAGSLRQLDPKVTAKRNLDTFLYTVVDFGPLHVDSQS
AALKQLENIGFHVNRERRLCKDIAEIWDYIEEFQARRTTLPYEIDGVVIKVNDFHQQDEL
GFTVKAPRWATAYKFPPEEAQTELLDIEWTIGRTGVVTPTAVMTPVRVAGTTVSRASLHN
VDFIKQKDLRIGDTVTIYKAGDIIPEVSQVVLDLRKKDSEPYPIPTKCPVCGSELVHLDD
EVALRCINPKCPALIKEGLRHFVSRDAMNIDGLGPKVLAQMYDHQLLTDVAGLYSITEEQ
LLTLPKIKEKSANNILQAIRASKDNSVERLLFGLGIRHVGSKAAKILAENFGNLEAIAKA
DKESIVVLDTLGETIADSIVTYFENEEVHDLLQELKTAGVNFDFKGRILNQSEIDSPFNG
KTIVLTGKLTHYNRNEAKEKIENLGGKVTGSVSKKTDIVVAGEEAGSKLLKAEELGITVW
NEQQMVEALDRSLVHED
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtcagaatcaatggcggagttaaccaaaaaagcggccgcattaaggcaagaa
ttaaataaatatgcttatgaatattatgtcaaagataatccaaccgtagaagattatgtt
tacgacaaactctatcacgatttagtagcaatcgaaacgcaatatccagagcttacaact
gctgactctccaacccaacgagtgggcggacaagtcttacaaggatttgaaaaagttgtt
catgatgttcctttgtacagcttaaatgatgtttttaataaagaagaaattaaggctttt
attaatcgtgtaaccaaagagttaggggagaatgtatcttatatctgtgagttgaaaatt
gatgggttgtctgtgacattacgctacgaagaaggtctttttgttcgaggtgctactcgt
ggcgatggaactgtaggagaaaacattacggagaatttaaaaactgttcgttcgattcca
ctacggctagaagaaccactaactattgaagtgcgcggggagtgttttatgcccaaaaag
tcttttgtggctttaaatgaaaaacgcgatgaattaggacaagcaatttttgccaatcct
cgcaatgctgcggctggaagcttgcgtcaattagatccaaaagtaaccgctaaacgaaat
ttagatacctttttatatacagtagtagattttggtccactacatgttgatagccaatct
gctgctttaaagcagttagaaaatattggtttccatgttaatcgcgagcgacgcttatgc
aaagatattgctgaaatttgggattatattgaagaatttcaagcccgtcgaaccacattg
ccttatgaaattgatggtgttgttatcaaagtcaatgattttcaccagcaagatgaatta
ggctttactgttaaggcaccacgatgggctacggcatataaatttcctcctgaagaagcc
cagacagaacttttagacatcgaatggacgattggacgaaccggtgttgtcaccccaact
gcagtaatgactccggtacgggtggcgggtaccacagtgagtcgtgccagtttgcataat
gttgattttataaagcaaaaagacttacgcattggagatacagtaactatctataaagct
ggagatattattcctgaagtctcacaagttgttttagatttacgaaaaaaagatagtgaa
ccctaccctattcctacaaaatgtcctgtttgtggtagtgagttagtccatttagatgat
gaagtggcactacgttgtatcaatccaaaatgtccggctttaattaaagaaggattgcgc
cattttgtctcacgggatgctatgaatattgatggtttgggtcctaaagttttagcgcaa
atgtatgaccatcagctactgacagatgtagcgggattatatagtataaccgaagaacaa
ttattgactttgccaaaaataaaagaaaaatcagctaataatatcttacaagctattcgt
gctagtaaagataattcggttgaacgtttattatttggtttgggtattcgacatgtagga
tctaaagcggcaaaaatattagccgaaaattttggtaatcttgaggcgattgccaaagca
gataaagaaagtattgttgttttggatactttaggagaaaccatcgccgacagtattgtc
acgtattttgaaaatgaagaagtccacgaccttttacaggaattaaaaactgcaggcgta
aattttgattttaaaggacgtattttaaaccagagtgagatagattctccttttaatggc
aaaacaattgttttaacaggcaaattaactcattataatcgcaatgaagccaaagaaaaa
attgaaaatctaggtggtaaagtaacaggtagtgtttcaaagaaaactgatatcgtggtg
gctggcgaagaggcaggcagcaaacttttaaaagcagaagaattggggattactgtctgg
aacgagcagcagatggtagaggctttagatcggagtttagttcatgaagattaa
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