Electrophorus electricus (electric eel): 113570717
Help
Entry
113570717 CDS
T05787
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113570717 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eee03000
]
113570717 (kdm2a)
04121 Ubiquitin system [BR:
eee04121
]
113570717 (kdm2a)
03036 Chromosome and associated proteins [BR:
eee03036
]
113570717 (kdm2a)
Enzymes [BR:
eee01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
113570717 (kdm2a)
Transcription factors [BR:
eee03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113570717 (kdm2a)
Ubiquitin system [BR:
eee04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113570717 (kdm2a)
Chromosome and associated proteins [BR:
eee03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113570717 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
113570717 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
Cupin_8
F-box
PHD
Rubredoxin
PsbP
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
113570717
NCBI-ProteinID:
XP_026855101
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MEESKSRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLEEKIKSKQFDSNLVKIMDGKDF
TFEYIQREGLRDPIIFPKSDGLGLQMPDPDFSVSDVKLFVGSRRVIDVMDVTTQKGIEMS
MGQWRRYYETPASEREKLYNVISLEFSHTKLEHLVKRPNAVDVVDWVDNMWPRHLKERQR
DSTNAIIDMQYPKVQKYCLMSVKGCFTDFHIDFGGTSVWYHVLRGGKMFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKANSCQRIELKQGYTFLIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPSKFRYPFYYEMCWYVLERYLYCLTNISHLTPEFQKHSLGIG
LKEDDITKPDKLNGHTRNGQTAEDDEMEQEEEEEVKQGVDDEESIPSPPARPGVKVHLTP
FELEGLWQLLHKLEELPAHKKCVPVGIRNAPALLNDIRALLKEHANDDPKQSYTGKPIVM
WPKRPSWYSPPPAPLSLLYRPRPPGSSPILPPVPRPVKPPSSLMRLRRRRGRCKRCEACL
RSECGDCTYCRDMKKFGGPGRLKKTCVLRQCLAPGLPLSAVCAICKEGSQEAEGSQATQA
LMECSECAQITHPECIKMPGDGVINKDLPSCWECPKCVHHKNTESSSSSSAEEGDGATMT
GLPSSGPPAKRAYREGIGVGGLRLGRRGRPALSLSLPLTRSRRQPPPSQRILLQHQQSRK
RAGALELQHRRRVKLERNKILHSTRSSVSLSPKLLRQRSLERGGVIGAGLGRGSSRGRGA
MSCRGRGVRLRGGGRGGALRGRHERDEDRDDSEEEGDGRDKEERRENGRGGKENRPHRHG
GRPKEEENRDGQQNGEHERERHEDGEQAQPDTSVVLSDETLVQRSCVTVTLQPTRGRRDP
STIVPKLEANVSSRSLPRSHGEMQGKSLLRPPLRNGARRTDRAHPHTEHPHTPMATPRPY
SGSPHLQSHTLTRSTSKHSQMSRSLRCNSRESHHGARGGKRPRLEKGRPPASSTSPASHA
SPELNGASEPGWERVVWVSVFRYLTRVELCICMAVCKSWYKWGCDKRLWTRISLSRCQSI
SPQALSGIIKRQPVTLDLSWTNISKKQLTWLINRLPGLKDLVLSGCTWASVSALSSPSCP
LLRSLDLRWADGVKDTQIRELLNPPGSNNRSQLRNMQCLRLCGLEVTEATLRLIIRHMPQ
LTRLELSHCPLTDNALNLLTAVGSSTRNTLTHLNLAGCSRLTDGCLSYLQRLSCLSVLDL
RSCKGVSRQACENFISELSVNTLYCLSDDKLIQRIS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtccaagtcccgttacagcaagcgcctgcgaacaggaacacggcggcgttac
caagacgatggaatctcagatgatgagattgaggggaagaggacttttgacttggaagaa
aaaattaaaagcaaacaatttgattcgaacctggtcaaaattatggatggaaaagacttc
acttttgagtacatccagcgtgaggggcttcgagaccccatcatctttcctaagtcagat
ggtcttggccttcagatgcccgatccagacttcagtgtgagtgatgtgaaactgtttgta
ggcagtcgacgagtgattgacgtaatggatgtaaccactcagaagggcatagagatgtca
atggggcagtggaggcggtactatgaaaccccggcctctgaaagggaaaagctctataac
gttatcagtctcgagttcagtcataccaaactagagcatcttgtcaaaagacctaacgca
gttgatgtggttgactgggtagacaacatgtggccacggcacttgaaggagagacagaga
gactctactaatgccatcatagacatgcaatacccaaaagtacagaagtattgtcttatg
agtgtaaagggctgcttcacagacttccacatagactttggcggcacatcagtgtggtac
cacgtccttagagggggcaagatgttctggctgatcccgcccacaccacaaaacctggag
ctctatgagaactgggtgctgtcagggaaacagggtgacatcttcctcggagacaaagcc
aattcctgtcagcggattgaactaaaacagggctacaccttcttgatcccttcaggctgg
atccatgctgtgtacactcctgaggatactctggtgtttggtggcaattttctgcacagt
ttcaacattccaatgcagctgaacatctacaacattgaggaccgcacacgggtcccatct
aagttccgctaccccttctactatgagatgtgctggtatgtgttggaacggtacctttac
tgtttgacgaacatctctcatctaacgccagagtttcagaaacactcactgggtatcggg
ttaaaggaggacgacatcaccaaaccagacaaactcaacggccacacacgaaatggacag
acagcagaggatgatgaaatggagcaggaggaagaggaggaggttaaacagggagttgac
gatgaggagtccataccatcccccccagcacggccgggggtgaaggtccatctcacgccg
tttgagcttgagggcctctggcagctgctgcacaaacttgaggagctgccggctcataag
aagtgcgtccccgtgggcatcagaaacgctcctgccctccttaatgacatacgggccttg
ctaaaggagcatgccaacgatgatcccaaacagtcttacactggaaaacccattgtcatg
tggcccaaaaggccctcgtggtacagcccaccccccgcccccctctctctgctgtaccgt
ccgcggccgccgggatcaagccccattctcccgcccgtgccacggcccgtaaagcctccg
tcctcactcatgcggctgcggcggcggcggggacgctgcaagcgctgtgaggcctgcctg
cgctccgagtgcggagactgcacctactgcagggacatgaagaagttcggcgggccaggc
cgcctcaagaagacctgcgtcctcagacagtgtctggctcccggcctgcccctctccgct
gtttgtgccatatgtaaggagggcagccaggaggcagaaggctcccaggccacccaggct
ctgatggagtgctccgaatgcgcacagatcacacacccggaatgtataaagatgccaggg
gatggtgtgatcaacaaggacctgcccagttgctgggaatgtcccaaatgtgtccatcat
aagaacacagagtcttccagcagcagttcagcagaagagggtgacggtgccacgatgacg
ggcttgccgtcctcaggcccaccggctaagcgggcgtacagggagggcatcggggtgggc
gggctgcgcttgggacgcagaggtcggccggccctctcactctccttgcccctgacccgc
tcgcggcgccagcccccaccctcgcagaggatccttctgcagcaccaacagagccgcaag
agagctggggcattggagctacagcaccgaaggagggtgaaattagaacggaacaaaatc
ctccattcgactcgttcatctgtctctctttctccaaagctcctgcgtcagcggagtttg
gagagaggtggcgtgatcggggcaggacttggcaggggatcatcccgtgggagaggggca
atgtcctgtcggggacgaggcgtgaggctccgaggtggaggacgaggtggcgctctgaga
ggaaggcacgagagagatgaagacagggatgatagtgaagaggaaggagacgggcgtgac
aaagaggagaggagggagaatggccggggaggcaaagagaaccgaccgcacaggcacgga
gggcggccaaaggaagaggagaacagagacgggcagcagaacggggagcatgagcgggag
cgacacgaggatggagagcaggctcagccagacacttctgtggtgctcagcgatgagact
ctggttcagaggtcgtgtgttactgtgaccttgcagcctacaaggggcaggcgggacccc
agcaccatcgtacccaagctagaggccaacgtgtcgtcaagaagcctcccccgaagccac
ggtgaaatgcagggcaagtcgttgctccgccccccgctccggaatggggcccgccgcaca
gacagggctcacccccatacagagcacccacacacacctatggccacaccgcggccatac
agtggcagcccgcacctccagtcccacactctgacaaggagcacctccaaacactcccag
atgagccgcagcctaagatgtaattccagagagtctcaccatggcgccaggggtgggaag
aggccacggctggagaaggggaggccccctgcctcctcaaccagccctgcctcacatgcg
tcaccagagttgaacggggccagcgagcctggctgggaaagagtggtgtgggtatctgtc
ttccgttacctgactcgagtcgaactgtgcatctgtatggccgtctgtaagagctggtac
aaatgggggtgtgataagcggttgtggacgcggatcagtttgagccgttgccagtctatc
agtccacaggccctttctggcatcatcaaacgccagccagtcacactggatctgtcctgg
accaacatatccaagaagcagctcacctggcttatcaaccgattgccagggctgaaagat
ctggtgttgtcaggttgtacctgggcatcagtctctgctctaagctctcccagctgtcct
ttactgcgctcattagatctgcgctgggcagatggggtcaaagacacccagatccgcgaa
ctgctcaacccaccaggcagtaataaccggtcccagctgcgcaacatgcagtgtctgagg
ctgtgtggtctggaggtgactgaggccaccctgaggcttatcatcaggcacatgccccag
ctgacaaggctggagctctcacactgccctctgaccgataacgccctcaacctcctcact
gccgtgggctcctccacacgcaacacactcacacatctcaacctggcaggttgcagtcgg
ttgacggacggctgtctcagctacctgcagcggttgtcctgtttgtctgttttggacctt
cgcagctgcaaaggagtctctcggcaggcctgcgagaacttcatctcagagctgtctgtc
aacaccctctactgcctatcagatgacaagctcatccagaggatatcatag
DBGET
integrated database retrieval system
