Escherichia fergusonii: EFER_0261
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Entry
EFER_0261 CDS
T00811
Symbol
ygdE
Name
(GenBank) putative methyltransferase
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efe03009
]
EFER_0261 (ygdE)
Enzymes [BR:
efe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
EFER_0261 (ygdE)
Ribosome biogenesis [BR:
efe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EFER_0261 (ygdE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
MIT_C
Motif
Other DBs
NCBI-ProteinID:
CAQ87830
UniProt:
B7LVW4
LinkDB
All DBs
Position
275415..276515
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AA seq
366 aa
AA seq
DB search
MNKVVLLCRPGFEKECAAEITDKAGRQEIFGFARVKENAGYVIYECYQAEDGDKLIRELP
FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFC
RKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF
PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVD
NGPMAQSLMDTGQVTWLREDGFKFRPTRNNISWMVCDMVEKPAKVAALMAQWLVNGWCRE
TIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVG
GRRDER
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggttgtattgttgtgtcgcccaggcttcgaaaaagagtgtgccgcagaaatc
acggacaaagcagggcgacaagagattttcggttttgctcgtgtgaaagagaatgcgggt
tatgtcatttatgaatgttatcaagctgaagatggcgataaattaattcgtgaattgcca
ttcagctcgttgatctttgcccgtcagtggtttgtggtgggcgagttgcttcagcattta
ccaccagaagatcgcattacccctatagtcggcatgttgcagggtgtggtggagaaaggc
ggtgagttgcgtgttgaagttgccgataccaacgaaagcaaagaactgctcaaattctgt
cgtaaattcacggtgccattacgtgcagcattgcgtgatgcaggtgtccttgcgaactat
gaaacgccgaagcgtccggtggtgcatgtgttctttattgcaccaggttgctgctatacc
ggttattcttacagcaataataattcaccgttctatatgggcattccgcgtctgaagttc
ccggcagatgcaccaagccgttccacgctcaaactggaagaggcatttcatgtatttatt
ccggcagatgagtgggatgaacgtctggcaaacggaatgtgggcagtggatctgggggct
tgccctggcggttggacttaccagttagtgaagcgcaacatgtgggtatattccgttgat
aacggcccgatggcgcaaagtttgatggataccggccaggtcacatggctacgggaagat
ggttttaaattccgtccgacgcgtaacaacatttcctggatggtgtgcgatatggttgag
aaacctgcaaaagtagctgcactgatggcgcaatggctggttaatggctggtgccgtgaa
accatcttcaaccttaaactgccaatgaaaaaacgctacgaagaagtgtcacataatctg
gcgtacattcaggctcagcttgatgaacatggcattaatgcccagattcaggcgcgacag
ttgtatcacgatcgcgaagaagtgacggtgcatgtccgtcgtatatgggctgctgttggt
ggtcgtcgcgacgaacgctaa
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