Escherichia fergusonii: EFER_1410
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Entry
EFER_1410 CDS
T00811
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
efe
Escherichia fergusonii
Pathway
efe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFER_1410 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efe03400
]
EFER_1410 (nth)
Enzymes [BR:
efe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EFER_1410 (nth)
DNA repair and recombination proteins [BR:
efe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EFER_1410 (nth)
Prokaryotic type
EFER_1410 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
P_gingi_FimA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAQ88930
UniProt:
B7LQN7
LinkDB
All DBs
Position
complement(1449785..1450420)
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AA seq
211 aa
AA seq
DB search
MNQTKRVEILTRLRDNNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGLKSYIKTIGLFNTKAENVIKTCRILLEKHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaactaaaagagtggagatcctcacgcgcctgcgtgataacaatccacatcca
acaactgaactcaatttttcttcaccgtttgaactgttaatcgcagtactactttcagcc
caggcgacggatgtcagcgttaataaagccacagcaaagctctatccagttgctaatacg
cccgctgcgatgctggagttgggtgttgaaggcctgaagtcatatatcaaaactatcggc
ttattcaacactaaagcagaaaatgtgattaagacctgccgtattctgctggagaaacat
aacggtgaagtaccagaagatcgcgcggcactggaagctttgcctggtgtgggcagaaaa
acggccaatgtagtgctcaataccgctttcggctggccgactatcgcggttgatactcat
attttccgcgtctgtaaccgtacgcagtttgcgccaggtaaaaatgtcgaacaggtggaa
gagaagctgctgaaagtagtaccagcggagttcaaagtagattgtcaccactggcttatt
ttgcatggtcgttatacctgcatcgcccgtaaaccacgctgcggctcatgtatcattgaa
gatctttgtgaatacaaagagaaagtcgatatttga
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