KEGG   Escherichia fergusonii: EFER_1802
Entry
EFER_1802         CDS       T00811                                 
Symbol
ycfD
Name
(GenBank) conserved hypothetical protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
efe  Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:efe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:efe03009]
    EFER_1802 (ycfD)
Enzymes [BR:efe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     EFER_1802 (ycfD)
Ribosome biogenesis [BR:efe03009]
 Prokaryotic type
  ribosomal protein modification factors
   EFER_1802 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_1 Cupin_2 AraC_binding TonB_dep_Rec_b-barrel
Other DBs
NCBI-ProteinID: CAQ89317
UniProt: B7LSN1
LinkDB
Position
1857112..1858233
AA seq 373 aa
MEYQLTLNWPDFLQHHWQKRPVVIKRGFNNFIDPISPDELAGLAMESEVDSRLVNNLDGK
WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLPMKQHCPHPDLLQVEPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRDLGGNYYSDPDLPSRSHPA
DILPQEMDKLRGMMLDLINQPEHFSQWFGEFISQSRHELDVAPPEPPYQPDEIYDALSQG
ESLVRLGGLRVLRIGDDVFANGEKIDTPHRQALDALASHIVLTADNFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaattaaccctcaactggcccgattttctgcaacatcactggcaaaagcgc
ccggtggtgataaaacgcggctttaataacttcatcgatcctatctccccggacgaactg
gctgggctggcgatggaaagtgaagtcgatagccgtcttgtaaataatctcgatggcaaa
tggcaagtcagtcacggtccttttgaaagctatgatcatttgggtgaaaccaactggtca
ctgctggtacaagccgtcaaccactggcatgagcctacagccgcgctgatgcggcccttc
cgcgagctaccggactggcgtattgacgatctcatgatctccttttcggtgcctggcggc
ggtgttggcccccatctcgatcaatatgatgtgtttatcattcagggcacggggcgtcgt
cgttggcgtgttggcgaaaaactgccgatgaagcaacattgcccacaccctgacctgctg
caggtggaaccattcgaagcgattattgatgaagaactggaaccaggcgatatcctgtac
attccaccaggatttccgcatgaaggctatgcgctggaaaacgccatgaactactctgtt
ggttttcgtgcgccaaatacccgtgagctaattagcggttttgctgattatgtactgcaa
cgtgatcttggcggtaattactacagtgatcctgatctgccttcccgtagccaccctgcc
gatatcctgcctcaggagatggataaactgcgcggaatgatgcttgatctcatcaatcag
ccggagcatttctcccagtggtttggtgagtttatttctcagtcacgtcatgagttggat
gttgcaccgccggaaccgccttaccaacccgatgagatttacgatgcgctttcccagggc
gagtcattagtccgtcttggtggtctgcgggtattacgtattggcgatgatgtctttgcc
aatggcgagaaaattgacactccacatcgccaggcactggatgctctggccagtcatatt
gtcctgacagccgataacttcggcgatgcgctggaagatccctctttccttgctatgctg
gcagcactggtaaatagcggttactggttcttcgaagggtaa

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