Effusibacillus dendaii: skT53_03200
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Entry
skT53_03200 CDS
T06872
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
eff
Effusibacillus dendaii
Pathway
eff03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
skT53_03200 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eff03400
]
skT53_03200 (nth)
Enzymes [BR:
eff01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
skT53_03200 (nth)
DNA repair and recombination proteins [BR:
eff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
skT53_03200 (nth)
Prokaryotic type
skT53_03200 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BCJ85335
UniProt:
A0A7I8D5H5
LinkDB
All DBs
Position
309794..310459
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AA seq
221 aa
AA seq
DB search
MKKSEIPILLSHLEQLYPDASCELVHRNAFELLIAVILSAQCTDKLVNQVTPGLFAKYPK
PEDFLSLSQEELENEIRKIGLFRSKAKHILETCQILVSEHNGEVPNDYDALVNLPGVGRK
TANVVMSNAFGVPAIAVDTHVNRLSHRLGLTKANNVLGTERDLMRKLPKEKWTFAHHALI
LHGRRVCFARSPKCEICPMQEICAYFKAEQKNAEKTRSGRR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtgaaattcctattctattgagtcatctcgaacagttgtatccggatgca
agctgcgaactggtccaccgcaacgcatttgaactattgattgcggtaatcctgtccgct
caatgtactgacaagttggtaaatcaagtaacccctggtttgtttgccaaatatccgaaa
ccggaagattttttaagtttgtcgcaggaggagttagagaacgaaattcgtaaaatcggc
ttattcaggtcgaaagcaaagcatattttggaaacttgccaaattcttgtcagcgagcat
aacggagaagtgccaaacgattatgatgcattggtgaatttgccgggggttggcaggaaa
acggccaatgttgtaatgagtaacgcattcggtgttcccgcaattgcggttgatacccat
gtgaatcggctgtcccacaggctgggattgacaaaagcaaacaatgtgttggggacagaa
cgggatttgatgagaaaattgccaaaggaaaagtggacatttgctcatcatgcgttgatt
ttgcatggcagacgggtttgttttgcccgtagtccgaaatgcgaaatttgtcctatgcaa
gagatttgcgcttattttaaagcagaacaaaagaacgcggaaaagacacggtcaggcagg
cgctaa
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