| Entry |
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| Symbol |
dnaQ
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| Name |
(GenBank) DNA-directed DNA polymerase III epsilon subunit
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| KO |
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| Organism |
efi Enterococcus faecalis OG1RF
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:efi00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OG1RF_10940 (dnaQ)
09124 Replication and repair
03420 Nucleotide excision repair
OG1RF_10940 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:efi03021]
OG1RF_10940 (dnaQ)
03036 Chromosome and associated proteins [BR:efi03036]
OG1RF_10940 (dnaQ)
03400 DNA repair and recombination proteins [BR:efi03400]
OG1RF_10940 (dnaQ)
Enzymes [BR:efi01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
OG1RF_10940 (dnaQ)
Transcription machinery [BR:efi03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OG1RF_10940 (dnaQ)
Chromosome and associated proteins [BR:efi03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
OG1RF_10940 (dnaQ)
DNA repair and recombination proteins [BR:efi03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OG1RF_10940 (dnaQ)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
980999..983461
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| AA seq |
820 aa
MIVFVLDFFLLFSECMFYNREADRWDYVKSTRKIAVRQVVEFILRRGSIDSRHVSEHTPQ
EGSRLHRMLQKEAGSLYQKEVSLKIEVPLNGHNYCVEGRADGIFVKETGQVVIDEIKTSE
PAFEELPPEKVELFWYQAMCYGHMYCQQEQLSEITLQLTYYQTTTKQITRQERHFTEAAL
AEFFTDLMKRYEQWVIFKEEWRILRNKSLKNLSFPYGEYRKGQRELAVAVYKTILSKQRL
FVEAPTGTGKTMSTLFPAMKAIGEEEGERIFYLTAKTITRQVAEDAVKALSEKQAQTKSI
TLTAKDKICFLTERNCTPEHCPFADGYYDRLNEGLWDLLQHENHLTREVIERYAQKHQLC
PFELSLDASLWCDLIIGDYNYLFDPTVYLRRFFEEPQSAEENIFLVDETHNLVNRSREMY
SAAISRNAVLQIQKRLQKESVQLKRACQKVLTTFDDIEAICEEKDTDFFAQRAPIDSLVK
QIHRLTEVIAEWLPENQHIEELASILSFYFDCLSYLRISEYYDNGFYTSISLRNYDCVVK
QFCVDPAYLLSQRLDKGKASILFSASLTPLNYYQEVLGGGEESLRYRIPYPFPEENQLLM
IGSHLQTTYKNREKSYPQISELLGKLSETKTGNYLIFFPSYAYMDDVYQVFSQRYPQVKT
QIQGTDLNEKEREAFLAEFKENPQETFIGFCVLGGIFSEGIDLKGTRLIGTIIVSVGLPQ
MNPEQELIRTFYQEERGQGFQFAYQIPGMNKVLQAAGRVIRDARDKGFVLLLDERFELPS
VKRFFPPHWLAHRKANTNEQLIQQVKQFWLKNKENKGGNK |
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| NT seq |
2463 nt +upstreamnt +downstreamnt
atgattgtgttcgttttggatttttttcttttgtttagcgaatgtatgttctataatagg
gaggcagataggtgggattacgtgaaatcaacgagaaaaattgcggtgcgtcaagtggtc
gaatttattttaaggcggggaagtatcgattctcgccatgtgagtgaacatacaccacaa
gaaggtagtcgccttcatcgaatgttgcaaaaggaagcggggagcctttatcaaaaggaa
gtatctttaaaaattgaggtgcctttaaatggacataattattgtgtagaaggtcgtgca
gacggcatttttgtgaaagaaactgggcaagtggtcattgatgaaattaaaacatccgag
ccagcgtttgaagaattgccgccagaaaaggtcgaattgttttggtatcaagcgatgtgt
tatggtcacatgtattgccaacaagaacaactttctgaaataacgcttcaactcacttat
tatcagaccaccacaaaacaaatcacacgacaagaacgccattttacagaagctgcatta
gcggagttttttactgatttgatgaagcgctatgaacagtgggtaatttttaaagaagag
tggcgtattttgagaaataaatcattaaaaaatcttagttttccttatggggagtatcgc
aaagggcaacgagaattggcggtagccgtctataaaacaattcttagtaaacagcggctc
ttcgtggaagcaccaactggaacaggcaagacaatgtccactctttttccagcgatgaaa
gcaattggtgaagaagaaggcgaacggattttttatttaacagctaagaccatcacgcgg
caagtggctgaagatgccgtcaaagcgctgtccgaaaaacaagcgcaaactaagagtatt
acgttaacagcaaaagataaaatttgttttttaactgaacgaaattgtacaccagaacat
tgcccgtttgctgacggctattatgatcgtttaaatgagggactgtgggatttattgcaa
catgaaaatcatttaacgagagaggttattgaacggtatgcacaaaagcaccaattgtgt
ccattcgagttgtcgctagatgcaagtctttggtgtgatttaattattggcgattacaat
tatctatttgatccaacggtttatttacggcgcttctttgaagaaccccaaagtgcagaa
gagaatatttttttagtggatgaaacccataatttggttaatcgttcacgggagatgtat
tcggccgctatttctaggaatgcggttttgcaaattcaaaaaagattgcaaaaagaatct
gttcaattaaaaagagcttgtcaaaaagtcttaactacgtttgatgatattgaagcaatc
tgtgaagaaaaagacacggatttttttgcccaacgtgcgccaattgattcattagttaaa
cagatacatcgattaacagaagtaattgcagaatggttgccagaaaatcaacacattgag
gaattggcgtcgattctcagtttttattttgattgtttaagttatcttcgaatcagcgag
tattacgacaacggcttttatacgtctatttctttgcgaaactatgactgcgttgtgaaa
caattttgtgtcgatccggcttatttattgtcacaacgattagataaagggaaagcgagt
atcttattttcggcaagtttaacacctctgaattattatcaagaagtgcttggtggaggt
gaagaaagcctacgttatcggattccgtatccttttccagaagaaaatcaattgttgatg
attggtagtcatcttcaaacaacctataaaaaccgtgaaaaaagttatccacagattagt
gaacttttagggaagttaagtgaaacaaaaacaggtaattatttaattttcttcccttct
tatgcctatatggatgatgtctatcaagtatttagccaacgttacccgcaagtaaaaact
caaattcagggaacggacttaaacgaaaaagagcgagaagcatttttagctgaatttaaa
gagaatcctcaagaaactttcatcggtttttgtgttttaggtggtatattttcagaagga
attgacttgaaaggtacccgattgattggtacgataattgttagtgtcgggctaccacaa
atgaatccggagcaagaactgattcgcactttttatcaagaagagcgagggcaagggttt
caatttgcgtatcaaattcctggcatgaataaagtcttgcaagcggctggacgtgtcatt
cgagatgcgcgagataaaggctttgtgttgttattagacgaacgatttgaattaccaagt
gtcaagcgtttctttccgccgcattggttggcgcatcgtaaggcaaacaccaatgaacaa
ctcattcaacaagtgaaacaattttggttaaaaaataaagaaaacaaaggaggaaacaaa
tga |
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