Enterococcus faecalis OG1RF: OG1RF_10957
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Entry
OG1RF_10957 CDS
T01882
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
efi
Enterococcus faecalis OG1RF
Pathway
efi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OG1RF_10957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efi03019
]
OG1RF_10957
Messenger RNA biogenesis [BR:
efi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OG1RF_10957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
AEA93644
LinkDB
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Position
997521..999209
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AA seq
562 aa
AA seq
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MSTIKIVPLGGVRENGKNMYVAEVEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEENSE
RIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVIDP
HTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRLAE
IGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQVLN
AADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGRMG
EPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISDNL
RVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRGDILE
YTKGRMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKRIVSP
AKITSRGFVYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYLFEQTK
RRPVILPVIMEATQRKRPKNNA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacaataaaaatcgttccattaggcggcgttcgtgaaaatggaaaaaatatgtac
gttgctgaagtggaagatgaaatttttgtactggattgtggattacaatatccagagaac
gaacttttaggaattgacgtcgtcattccggattttacgtatttagaagaaaatagtgaa
cgaattgcaggggtctttttaacacatggccatgcagatgcaattggggccttaccgtat
ttgctttcaaaaattcaagtgcctgtttttgggacagaattaacgattgaactagcaaaa
ctaagtgtcaacagtcatgcggaaacgaagaaatttaaagatttccatgtgattgacccg
catacagaaattgattttggtcaagcaacggtgagcttctttaaaacaacgcacaccatt
ccagattcgattggcgttagcatcaaaacaaaagaaggcaacattgtttatactggtgat
tttaaatttgatcaaagtgcgattgagatgtatcaaaccgattatggccgcttggctgaa
attgggaaagaaggcgtcttggcgctacttagtgattcatcaaatgctgaaaacccagcc
caagttgcatcggaagcccaaatcgctgatgaagtgttcgacacgattcgctattgggaa
ggacgaatcatcgtggcatgtgtggcaagtaatttgcaacgggtccaacaagtattgaat
gcagcggatcgttctggtcgtaaagtcgttttgacaggccaagattttgaacggattatt
cggacggcgatgaaattggaaaaattacaattgccaagcgaagatctattagtgaaacca
aaagaaatgaaaaaatatgcacccgaacagttattaattttagaaacaggccggatggga
gaaccgattaagtcacttcaaaaaatggctaataatacacatggtgtcgttcgaattgaa
gaaggcgatttagtttatattacgacaacgccgacaacggccatggaaacaacggttgcc
aaaacagaggatattgtctatcgggccggtgctacggtgaagcaaatttccgacaattta
cgtgtgtctggtcacgctaatccgaatgacttgcaattgatgttgaacttaatgaaacca
aaatatttcattcctgtccaaggtgaataccgccagttagctgcgcatgcggacttagca
cacgaaattggcatgccttataaagatatctttattacaggtcgtggggacattctagag
tatacaaaaggtagaatgtcggtagctggcagcacaacggccgaaaatattatgattgac
gggattggtgtcggcgatattggtaatatcgttttacgagatcgtcgtattctttccgaa
gatggtatttttgtggctgttgtgacaattaatcgccgagaaaaacgaattgtttcccca
gctaaaattacttctagaggttttgtttacgttaaaacaagtaaagacctaatgaaagaa
agtagcaatattgttacagaaattgttgaaaaacatttagaaagtgacgattttgaatgg
agcaaactgaaacaagaaatccgcgaaaacttaagccgttatttatttgaacaaaccaaa
cgtcgtcctgtgatcttaccagttatcatggaagcgacgcaacgcaagcgtcccaaaaat
aacgcatag
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