Enterococcus faecalis OG1RF: OG1RF_11242
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Entry
OG1RF_11242 CDS
T01882
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
efi
Enterococcus faecalis OG1RF
Pathway
efi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
efi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OG1RF_11242 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efi03021
]
OG1RF_11242 (rpoD)
Transcription machinery [BR:
efi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OG1RF_11242 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AEA93929
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All DBs
Position
1300794..1301900
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AA seq
368 aa
AA seq
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MEKETSKKYEAAVAAFIKENKPKGTVVYDDLANQLATPYTLDAEAMEKLIQKVEDAGISV
VDENGDPSEHSLKKDEKEAEKAQAEDLSAPTGVKINDPVRMYLKEIGRVQLLTAAEEVEL
ALKIEEGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIG
AEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPAEHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaacaagtaaaaaatatgaagctgcagtggcagcatttatcaaagaaaac
aagcctaaaggaacagtggtttatgatgatttagcgaatcaattagccacaccgtatact
ttggatgcagaagctatggaaaaattgatccaaaaagttgaagatgctggtatcagcgtg
gtcgatgaaaatggagacccaagtgaacatagcttgaaaaaagatgaaaaagaagcggaa
aaggcccaagcagaagacttatctgcgccaacaggtgttaaaattaatgatcccgtgcgt
atgtacctaaaagaaattgggcgcgttcaattattaactgccgcagaagaagttgaattg
gcacttaaaattgaagaaggcgatcaagaagcaaaacaacgtttagcagaagctaactta
cgtttggttgtttcaattgccaaacgatatgtaggtcgtggtatgcaattcttggattta
attcaagaaggtaatatgggcttaatgaaagctgttgaaaaatttgactaccgtaaagga
ttcaaattctctacgtatgctacttggtggattcgtcaagcgattacgcgggcaattgcg
gatcaagctagaacgattcgaattcctgttcacatggttgaaacaatcaataaattgatt
cggattcaacgccaactattgcaagatttaggtagagaaccaacgccagaagaaattggt
gcggaaatggatttaccaacagaaaaagttcgtgaaatcctaaaaatcgcacaagagcca
gtctctttagaaacaccaattggtgaagaagatgattcacatttaggtgatttcattgaa
gaccaagatgctaccagtcctgctgaacatgcagcttacgaattgttaaaagaacaacta
gaagatgttctggatactttaacagaccgtgaagaaaatgttttacgtttacgttttggt
ttagatgatggtcggacacgtacgctagaagaagtcggaaaagttttcggtgtcactcgc
gaacgtattcgtcaaattgaagcaaaagcgttaagaaaactaagacatccttctcgttca
aaacaattaaaagactttttagaataa
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