Enterococcus faecalis OG1RF: OG1RF_12058
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Entry
OG1RF_12058 CDS
T01882
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
efi
Enterococcus faecalis OG1RF
Brite
KEGG Orthology (KO) [BR:
efi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efi03400
]
OG1RF_12058 (sbcC)
DNA repair and recombination proteins [BR:
efi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OG1RF_12058 (sbcC)
Archaeal homologous recombinant proteins
OG1RF_12058 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
WSN
DUF3781
Shufflon_N
Motif
Other DBs
NCBI-ProteinID:
AEA94745
LinkDB
All DBs
Position
complement(2177554..2180691)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPLSLTLKNFGPYINETIDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKLR
LGKEMRSTFADPSEATEVTLLFKHNEYLYELNRLPEQELFKKRGTGVRKQSAKISLIVKD
AQGKELRAYSKRREVDELIQELLHLNANQFAQIVLLPQGEFRTFLIAKSDEKEKVLRNLF
GTELYQLFSENLKERLKIANQEIQETQQKIELKTEQLHWSEEPEPTMTLFEKLQLLESQQ
QEAQQQLLVEREQIATLKQAKQAKEQVRYAIEERQNLQQQKEELLEKKAKQAEQETVIER
LKEQIQQLKWSQKQQSLAEKVFEKRSEKQQKEQETKSKQQALMETQQALTDWQAIMSELE
EQQPLIAEKQERLQTIQRQLPQYQEYEQLAQRKIAEQANYQAIQKEYESCQQEKTTLADK
VATAKQFIEQEGTLEKANFECSSVADHWQNFVERWQKNQKAWQKISQNQGELHELTQRFA
VEQQQKSVEEAKLQTKKSQWASLQIQRLSLLLEEGEPCPVCGSLEHPKQQTHQEVSLEEI
DQAERELTEVEKTVQRFTETLSALGAEKQQKESQLQEQEAAYTEEQEQLAAQFADLQLPL
TGLTFSQVTPAEIAEVESQLAKEKQQIAQKLTEISVEKDRLAELEEQVAENSQRFEVLRQ
QVETMQQSLERITIQQQMIASQLLDATVTYEEMTKQQALLQEELSAFERQKENVTTQGET
LKKEEMILESTLTHLEKEQQTLQQTVAQLESQLNAVLTEQGVTEDQLTEWLKEVPTLESQ
QEQIALFEQEQTQLTIQLAEIEKKLSSDTFPELSLITTEIEQITQQIEEQEKKYYQLHEK
MLNNQQLVQEINAQRTTIEDKFEEVAALQQLADTVNGNNPKKISFERYMLQTYLERVLTV
ANQRLDRLTNSRYQFELNHEAGSYRNQTGLEINIYDDNSGTVRSAHTLSGGESFIAALAL
ALSLAEVIQEQAGGVLIDALFIDEGFGSLDEEALEMAMEALETIENEGRMIGIISHIGEL
KARIPQQLQIKSNGNGQSTVHYQLA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattatctttaacattgaaaaacttcggaccgtatattaatgaaaccattgat
tttacgaagtttgaagattcttcactttttctaattagtggaaaaacagggtctgggaaa
acaacgatttttgatggaatgagctatgctttgtttggtgaaagttctgggaaattacgt
ttaggcaaagaaatgcgttccacatttgctgacccctcagaagccactgaagttactttg
ctttttaaacataacgagtatctctatgaactgaaccgccttcccgaacaagaacttttt
aaaaaacgtggcacaggagtccgtaaacaaagtgccaaaatttctttaattgtcaaagat
gctcaagggaaagaactacgagcctattctaaaagacgcgaagtggacgaactcattcaa
gaattattgcatttgaatgccaatcaatttgctcaaattgtattgttaccacaaggagag
tttcggacttttttaattgctaaaagtgatgaaaaagaaaaggttttgcgtaatttattc
ggaacagaattgtatcagttgttcagcgaaaatttaaaagaacgcttaaaaattgccaat
caagagattcaagaaacccagcaaaaaattgaactgaaaacagaacagttgcattggtca
gaagaacctgaaccgacaatgacactttttgaaaaacttcaattattagaaagccaacaa
caagaggctcagcaacaactattagttgaaagagaacaaattgcaaccttaaaacaagcc
aaacaagcaaaagagcaagttcgttatgctattgaagaacgacaaaacttgcaacagcaa
aaagaagaattactggaaaagaaagcaaaacaagctgaacaggaaaccgtcattgagcgg
ttaaaggaacagattcagcaattaaaatggagccaaaaacagcaatctttagctgaaaaa
gtctttgaaaaacgaagcgaaaaacaacaaaaagagcaagaaacaaagtccaaacaacaa
gctcttatggaaacgcaacaagcattgacagattggcaagcaatcatgagtgagttggaa
gaacaacaaccattgattgctgaaaaacaagaacgtcttcaaacgattcaacgtcaatta
ccacaataccaagaatatgaacagttagctcaacgaaaaatagcagaacaagccaattat
caagccattcaaaaagagtatgaatcttgccaacaggaaaaaacaacattggcggataaa
gtggcgacagccaaacaatttattgaacaagaaggaacacttgaaaaagcaaattttgaa
tgttctagtgtagcagatcattggcaaaattttgtagaacgttggcaaaaaaatcaaaaa
gcttggcaaaaaattagtcaaaaccaaggggaattgcacgagttgacacaacggtttgct
gttgaacagcaacaaaaaagcgtcgaagaagcgaagttgcagacaaagaaaagtcaatgg
gcctctttacaaatccaacgattaagcttgttacttgaagagggggaaccttgcccagtt
tgtggctctttagaacatccaaaacaacaaactcatcaagaagtttccttagaagagatt
gatcaagcggaacgggaattaacggaagttgaaaaaacggttcaacgatttactgaaacg
ctctctgcattaggggcggaaaagcaacagaaagaaagccaattacaagaacaggaagct
gcgtatactgaggaacaagaacaattagcagcgcagtttgctgacttgcagttgccgtta
acaggactaactttttcacaagtaacacctgcagaaattgcggaagttgagtcgcaatta
gctaaagaaaaacaacaaatagcacaaaaactaacggaaatttcagtcgaaaaggaccgt
ctggcggaactagaagaacaagtagctgaaaattctcaacgctttgaagtgctccgacaa
caagtagaaacaatgcaacaaagtctggaaagaatcactatccagcagcaaatgattgct
agccaattattggatgcaaccgtcacatacgaagaaatgaccaaacaacaagctttgctt
caagaagaactctctgcatttgaacgtcaaaaagaaaacgtgacgacacaaggagaaacc
ttgaagaaagaagaaatgatccttgaaagtacgttgactcatttggagaaagaacaacaa
acacttcaacaaacagtcgcacaacttgagagtcagttaaacgcagttttaacggaacaa
ggagtgacagaggaccaattgacggagtggttgaaagaggtaccgacactagaaagtcag
caagaacaaattgctttatttgaacaagagcaaacccaactgactatccaactcgctgaa
attgaaaaaaaattatctagtgatacgttcccagaattatctttaatcaccacagaaatt
gaacaaataacacaacaaattgaagaacaagaaaaaaaatactatcaactgcatgaaaaa
atgctgaacaaccaacagttggttcaagaaattaatgcgcaaagaacaacaattgaagac
aagtttgaggaagttgctgcactacaacaattggcagatacggtgaatggcaataatcct
aaaaaaattagttttgaacggtatatgttacaaacgtatttagaaagagtgctgacagtc
gctaatcagcgtttagaccgcctgaccaatagtcgttatcaatttgaattgaatcacgaa
gcaggtagttatcggaatcaaacggggctagaaatcaatatttatgatgacaattcaggg
acggtgcgcagcgctcacacgttatcaggcggggaaagttttatagcagcgttagctttg
gcactttctttagcagaagtgattcaagaacaagcaggcggagtcttaattgatgcgttg
tttattgatgaaggctttggttccttagatgaagaagcattggaaatggcaatggaggcg
ttagaaacgattgaaaatgaaggccgcatgattgggattattagtcatattggcgaatta
aaagcacgaattccacaacaattacaaataaaaagcaatgggaatggtcaaagtaccgtt
cactatcagctagcttag
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