Enterococcus faecalis OG1RF: OG1RF_12059
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Entry
OG1RF_12059 CDS
T01882
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
efi
Enterococcus faecalis OG1RF
Brite
KEGG Orthology (KO) [BR:
efi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efi03400
]
OG1RF_12059 (sbcD)
DNA repair and recombination proteins [BR:
efi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OG1RF_12059 (sbcD)
Archaeal homologous recombinant proteins
OG1RF_12059 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
EndA_linker
Motif
Other DBs
NCBI-ProteinID:
AEA94746
LinkDB
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Position
complement(2180696..2181964)
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AA seq
422 aa
AA seq
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MMLPVFFLVLRKKFVKNLILLSDFLKKYQKFVIIIRRTFLGGEKMKFLHTADWHIGKKLH
GFDLLAEQKEAFKQILAIAKEEQVDAVVIAGDLYDRSVPAVEAVEIFNEMMIQMNLKEHL
PVLAISGNHDSSTRLETGGPWFNQTQFHLNTRLEQAFQPIEIDNTQFYLLPYFEPIAARL
YFEDETIRTIQAAMEKVVAKMQESFLPNKKQVLVSHFFVAGSEKTDSETKLTVGGLDVVP
TALLEPFDYVALGHLHGKNALQAPNARYSGSPVKFSLSEMTQEKGVWLVETETEVHFQFR
TLKPLRDIQQLTGSFQQLTDPAFYQEVNRENYLHVQLTDRAIIPNMMNQLRKIYPKIIGL
ERLNGRETSNGNQKKVVQIEQRSPEEHLHDFFNDVTGEALTEQQAQWVQEELSTLNQLER
GK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccctgtcttttttcttgtgttaagaaaaaagtttgttaaaaatctaattctt
ctgtccgattttcttaaaaaataccagaaatttgttataataataagaaggactttttta
ggcggtgaaaaaatgaaatttttacatacagcagattggcatattggcaaaaaattacat
ggttttgatttattggcagaacaaaaggaagcctttaaacaaatcttagcaattgcgaaa
gaagagcaagtggatgctgttgtgatcgctggagatttgtatgatcgctctgttccagcg
gttgaagcagtcgagatttttaatgaaatgatgattcaaatgaatctcaaagagcattta
cccgtgttagctatttcgggaaaccatgatagcagcactcgtttagaaacaggaggccct
tggtttaaccaaacgcaatttcatttgaatacgcgtttagaacaagcctttcaaccaatt
gaaatcgacaatacccaattttatttgttgccttattttgaaccgattgcggctcgctta
tattttgaagatgaaacgattcgaacgattcaggcggcgatggaaaaagttgtcgcgaaa
atgcaagaatcttttctccccaataaaaaacaggtgttagttagtcatttttttgtcgct
ggcagtgaaaaaactgattctgaaacaaaattaacagtgggtggtttggatgttgtaccg
acggctttgttagagccttttgattatgtcgcgttgggccacttacatggaaaaaatgcg
ttgcaggcacctaatgctcgatacagtggctcgcctgtaaaattttctttatcagaaatg
acacaagaaaagggtgtttggcttgttgaaacagaaactgaagttcattttcaattccgt
actttgaaaccattgcgagacattcaacaattgacgggctcgtttcagcagttaacggat
cccgctttttatcaagaagtgaatcgggaaaattatttacatgtccaattaaccgaccga
gcgatcattcccaacatgatgaatcaattgcgaaaaatttaccccaaaattattgggctg
gaacgtttgaatggtcgagaaacaagcaacggaaatcagaaaaaagtggtacaaatagaa
caacgttcaccagaagaacatctgcatgacttttttaacgatgtgacaggagaggccttg
acagaacaacaagcacaatgggtccaagaagaactgagtacacttaatcaattagaaaga
gggaagtaa
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