Enterococcus faecium ATCC 8459 = NRRL B-2354: M7W_1260
Help
Entry
M7W_1260 CDS
T02454
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
efm
Enterococcus faecium ATCC 8459 = NRRL B-2354
Pathway
efm03030
DNA replication
efm03410
Base excision repair
efm03420
Nucleotide excision repair
efm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M7W_1260
03410 Base excision repair
M7W_1260
03420 Nucleotide excision repair
M7W_1260
03430 Mismatch repair
M7W_1260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efm03032
]
M7W_1260
03400 DNA repair and recombination proteins [BR:
efm03400
]
M7W_1260
Enzymes [BR:
efm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
M7W_1260
DNA replication proteins [BR:
efm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M7W_1260
DNA repair and recombination proteins [BR:
efm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
M7W_1260
NER (nucleotide excision repair)
GGR (global genome repair) factors
M7W_1260
MMR (mismatch excision repair)
DNA ligase
M7W_1260
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M7W_1260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
Nlig-Ia
Zn_ribbon_NUD
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
AGE29884
LinkDB
All DBs
Position
1094430..1096469
Genome browser
AA seq
679 aa
AA seq
DB search
MMEHEMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLI
TSDSPTQRVGGKVLEGFEKVTHDIPLYSLNDVFSKEELIAFDQRVQKAVGRVVDYCCELK
IDGLSVSLRYEDGNFVRGATRGDGTVGENITENLKTVRSVPIKLKEPMNIEVRGECFMPK
RSFVQLNQDREAEGKDIFANPRNAAAGSLRQLDSKITAKRNLDTFLYTVADFGPMQAKTQ
YDALEELEKIGFHTNREKRLCHSIDEVWSYIEEYHDKRVDLPYEIDGIVIKVNEFSLQDQ
LGFTVKAPRWAAAYKFPPEEVETLIENIEWTVGRTGVVTPTAIMTPVRVAGTTVSRASLH
NGDYIKLKDIRLKDTVLIYKAGDIIPEVSQVVLDKRPKDSEEYQLPTHCPVCGSELVHLD
EEVALRCINPKCPAQMKEGLNHFVSRNAMNIDGLGPRVLEQMYDKKLVADVADLYKLTEE
ELLTLDKIKEKSANNILTAIDNSKDNSVERLIFGLGIRHVGAKAAKILAEHFGDLETLSK
SDYESIIALDTIGDIIADSVVTYFSNEEVHELMNELKQAGVNFEYKGLRNAQLQEVESPF
KEKTVVLTGKLTRFTREEAKETIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAQELGIE
VWTEDQMADALAKSRSVEE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacatgaaatgacgattgacgaagctgctaaacgagcagaagaacttcgtaca
agactgaaccaatggtctcgcgaatactacgtagaagataaaccaacagtggaagactat
gtttatgataaagaatacgcagaattagtagcaatcgaggaacaatatcctgatttgatc
acgtctgattctcccactcaacgagtaggcggaaaagtattagaaggttttgaaaaagtc
actcatgatattccgctttacagtttgaacgacgttttcagcaaagaagagctgatagct
tttgatcaacgtgtacaaaaagcagtgggacgtgtagttgactattgctgtgaactaaaa
atagatggactttccgtttctttgcgttatgaagatggaaatttcgtgagaggtgcgact
cgcggggatggaactgtaggagaaaacatcactgaaaacctaaaaactgtccggtcggtc
ccaatcaaattaaaagaaccaatgaacatcgaagtaagaggcgaatgtttcatgccaaaa
cggtcatttgtccaattgaaccaagacagagaagcagagggaaaagatatctttgcgaat
cctcggaacgccgcagctggttctttgcgtcagttagattctaaaatcacagcgaaaaga
aatctggacacttttttatacacagtagctgatttcggtcctatgcaagcaaaaacccag
tatgatgcgctagaagagctagaaaaaattggattccacacgaatcgggaaaaacgtcta
tgtcattcgattgatgaagtgtggtcatacattgaagaatatcatgacaaacgtgtggat
ttgccctatgaaatcgatggaatcgtcatcaaagtgaatgaattctcgctacaagatcaa
cttggttttactgtcaaagcaccgagatgggcagcagcttacaagtttccgccagaagaa
gttgaaacgctaatcgaaaacatcgaatggacagtcggtcgaacaggggtagtaacgcca
acagctatcatgacaccagtccgagtagcaggaacgacagtaagccgtgccagcctgcat
aacggtgattatattaagttgaaggatatccgcttgaaagatacagttctgatttataaa
gcgggagacatcatcccagaagtttcgcaagtcgtgttagataaacgacctaaagacagc
gaagaataccaattgcctacacattgtccagtttgtggaagtgaacttgtccatttggat
gaagaagtagccttacggtgcatcaatcctaaatgccctgctcaaatgaaagaaggtttg
aaccactttgtttcaagaaatgcgatgaatatcgatgggttggggccgcgcgtactagaa
cagatgtatgataaaaaactagtagcagatgttgctgatctttacaaattgacagaagaa
gagttattgacgttggacaaaataaaagaaaaatcagcaaataatattttgacagcaatc
gacaacagcaaagataattcggtcgagcggttgattttcgggttaggaatccgacatgtc
ggagcgaaagcagcaaaaattttagcagaacatttcggtgatctagaaacattgagtaaa
agtgactatgagtcgattattgcgcttgatacgatcggtgatatcattgccgacagtgta
gtcacttatttcagtaacgaagaagtccatgaattgatgaatgaattaaaacaagcaggc
gtcaatttcgaatacaaagggcttcgaaatgcccaattgcaagaagtcgagtctcctttt
aaagaaaaaacagtagtccttactggtaaactaacacgatttactcgtgaagaagcaaaa
gagacgatcgaaaatcttggcgggaaagtgactggtagcgtatcgaaaaaaacggatatc
gtggtagcaggagaagatgctggcagcaagctgaccaaagcacaagaattaggaatcgaa
gtttggacagaagatcaaatggcagatgcattggctaaaagtcgctcagtagaagaatga
DBGET
integrated database retrieval system
