Enterococcus faecalis DENG1: DENG_00771
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Entry
DENG_00771 CDS
T03043
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
efn
Enterococcus faecalis DENG1
Pathway
efn03030
DNA replication
efn03410
Base excision repair
efn03420
Nucleotide excision repair
efn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DENG_00771 (ligA)
03410 Base excision repair
DENG_00771 (ligA)
03420 Nucleotide excision repair
DENG_00771 (ligA)
03430 Mismatch repair
DENG_00771 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efn03032
]
DENG_00771 (ligA)
03400 DNA repair and recombination proteins [BR:
efn03400
]
DENG_00771 (ligA)
Enzymes [BR:
efn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DENG_00771 (ligA)
DNA replication proteins [BR:
efn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DENG_00771 (ligA)
DNA repair and recombination proteins [BR:
efn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DENG_00771 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DENG_00771 (ligA)
MMR (mismatch excision repair)
DNA ligase
DENG_00771 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DENG_00771 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AHI39825
LinkDB
All DBs
Position
665399..667429
Genome browser
AA seq
676 aa
AA seq
DB search
MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLI
TPDSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELK
IDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLTEPISVEVRGECYMPK
QSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQ
FEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFVLQDE
LGFTVKAPRWAIAYKFPPEEAETVVEDIEWTIGRTGVVTPTAVMAPVRVAGTTVSRASLH
NADFIQMKDIRLNDHVIIYKAGDIIPEVAQVLVEKRAADSQPYEMPTHCPICHSELVHLD
EEVALRCINPKCPAQIKEGLNHFVSRNAMNIDGLGPRVLAQMYDKGLVKDVADLYFLTEE
QLMTLDKIKEKSANNIYTAIQGSKENSVERLIFGLGIRHVGAKAAKILAEHFGDLPTLSR
ATAEEIVALDSIGETIADSVVTYFENEEVHELMAELEKAQVNLTYKGLRTEQLAEVESPF
KDKTVVLTGKLTQYTREEAKEKIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAESLGVS
VWNEQEMVDALDASHF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaaccattaacattaacggcggcgacaactcgtgcgcaagaattaagaaaa
caactcaatcaatattcccatgaatattatgtcaaagatcaaccatccgtagaagattat
gtttacgatcgtttgtataaagagttagtcgatattgaaacggagtttcctgatttaatc
acgccagattcgccgacacaacgtgtaggtggcaaagttttatctggttttgaaaaagct
ccgcatgacattccaatgtatagtttaaatgatgggtttagcaaggaagacatttttgct
tttgatgaacgtgttcgtaaggcgattggtaaacccgttgcttactgttgcgagttgaaa
attgatgggttagcaatttcattacgttatgaaaacggggtgtttgtacgcggagcaaca
cgaggcgatggaacggttggtgaaaacattacagagaacttacgaacggttcgctctgta
ccgatgcgtttaacggagcccatttcagtggaagttcgtggcgagtgctacatgcctaaa
caatcctttgtcgcgttgaatgaagaacgtgaagaaaatggccaagatatttttgccaat
cctcggaatgcagcggcgggaagcttgcgccaattagacacaaaaattgtggcaaaacgg
aacttaaatacgtttttatacacagttgctgactttggaccaatgaaagcgaagacgcag
tttgaggcattagaagagctttctgcaattggttttagaaccaatcccgaacggcaatta
tgtcagtcaatcgatgaagtttgggcctacattgaagaataccatgaaaagcggagcact
ttgccatacgaaatcgatggaattgtgattaaagtgaacgaatttgtgttgcaagatgaa
ttaggtttcactgtcaaagcacctcgctgggcgattgcctacaaatttccaccagaagaa
gcagagacagtagtggaagatattgaatggacaattgggcgcacgggagtggtcactcct
actgcggtcatggctcctgtacgagtcgcgggaaccacggttagtcgggcaagtttgcat
aatgcagattttattcaaatgaaagatatccgtttaaatgatcatgttattatttacaaa
gccggcgatattatcccagaagtagcgcaagtcctagttgaaaaacgtgcagccgatagt
cagccttatgaaatgccgacacattgtccaatttgtcatagtgagttggtgcatttagat
gaggaagtggcgttacgttgtattaatccaaaatgccctgcgcaaattaaagaagggctg
aatcactttgtctcacgaaacgcaatgaacattgatggcttggggccacgagtgttagca
caaatgtatgacaaaggattagtgaaagacgtagcggatctgtatttcttaacagaagaa
caattaatgactttggataaaatcaaagaaaaatcagcaaacaacatttacactgccatt
caagggagtaaagaaaactctgtcgaacgtttgatttttggcttaggaattcgccatgtg
ggggcgaaagcggcgaaaattttagcggagcattttggtgatttaccaaccttaagtcgt
gcaactgcggaagaaattgtggctttggattcaattggcgaaacaatcgcagacagcgtt
gtgacgtattttgaaaatgaggaagttcatgaattaatggctgaactggaaaaagcccaa
gtgaacttgacatataaaggtctccggacagaacaattagcagaagtggagtcacctttc
aaagacaaaacagttgttttaacaggaaaattaacgcagtacactcgcgaagaagccaaa
gaaaaaattgaaaatcttggtggaaaagttacagggagtgtttcgaaaaaaactgacatt
gtggttgctggcgaagatgcaggcagtaaattaaccaaagctgaaagcttaggcgtgagc
gtttggaatgaacaagaaatggtcgatgcgttagatgcaagtcatttttaa
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