KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125879233
Entry
125879233         CDS       T08419                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03420  Nucleotide excision repair
efo04110  Cell cycle
efo04114  Oocyte meiosis
efo04120  Ubiquitin mediated proteolysis
efo04141  Protein processing in endoplasmic reticulum
efo04310  Wnt signaling pathway
efo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:efo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125879233 (rbx1)
   04120 Ubiquitin mediated proteolysis
    125879233 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125879233 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    125879233 (rbx1)
   04350 TGF-beta signaling pathway
    125879233 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    125879233 (rbx1)
   04114 Oocyte meiosis
    125879233 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:efo04121]
    125879233 (rbx1)
   03400 DNA repair and recombination proteins [BR:efo03400]
    125879233 (rbx1)
Enzymes [BR:efo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     125879233 (rbx1)
Ubiquitin system [BR:efo04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   125879233 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     125879233 (rbx1)
   Cul2 complex
     125879233 (rbx1)
   Cul3 complex
     125879233 (rbx1)
   Cul4 complex
     125879233 (rbx1)
   Cul7 complex
     125879233 (rbx1)
   Cul8 complex
     125879233 (rbx1)
   Cul9 complex
     125879233 (rbx1)
DNA repair and recombination proteins [BR:efo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125879233 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125879233 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 125879233
NCBI-ProteinID: XP_049416926
LinkDB
Position
LG19:33943757..33946890
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccgagcggcacaaacagtggagctagcaagaag
cgatttgaagtaaagaagtggaatgctgtggcgctgtgggcgtgggacattgtggtggat
aactgtgcgatctgtaggaaccacatcatggatctttgtatagagtgccaggccaaccaa
gcttctgcaacctccgaggagtgcactgtagcctggggtgtctgcaatcatgccttccat
ttccactgtatttcccgctggctgaaaacccgacaggtgtgccctctggacaacagggag
tgggagtttcagaaatacggacactag

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