Epinephelus fuscoguttatus (brown-marbled grouper): 125879242
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Entry
125879242 CDS
T08419
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125879242 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125879242 (smcr8a)
Membrane trafficking [BR:
efo04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
125879242 (smcr8a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
CRISPR_Cas9_WED
Motif
Other DBs
NCBI-GeneID:
125879242
NCBI-ProteinID:
XP_049416940
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Position
LG19:34076484..34086336
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AA seq
940 aa
AA seq
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MIGSPDVVAFTKDDEYGQTTPDLWALPEEFSVPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLQDLEYTHSVLQKEEGLQREASPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHHRPRRDPHAVTCQKCVTECLSECEQLLEKYAKLANPFKYADKEEK
GEEGQGPVDDEGGEQEVDEDEDEVIKRRPSYTPQLIKAKSAKCFDKRLKTLQELCDDTFY
EATVELLKETERSFRGDLCYLHTRRLERALCRKQRVTNFLFEEDLGGDDEEDVGGTLRPF
CAVNHAVDNFTLLNPPPIVLGPEPLELHVLEPPDPLNRTQESELGIADNLESSPSDQTLE
TQESSEETKGSFSSDKSGVGLAEIQQNLSSMKSEAPDPDSDLTPDPDHNTDLERESSSEE
METTAGDDDGDETPVSLLEVVSELEASREDECDGVTDGACEEESDLLVPLDTACCMAQEG
FLYEASAPEAVSRLGQSPQPQPCETLVVNQEPQALLPLQDDYAVGSPCSDSPAAGLELPV
GPLGDAVSRTSVEDGSDCTMSASTGSDRAASPLGYGGVVTLRQRKKAGQGALRFVRQYPF
AMQALWCLLSGRTLVVLGADEGRVRRLVAALALFVPGPGKCGERVQAWLSCSFTLTDLQR
WKLIGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIADHRTYIRR
GSTYFLHLQSTLCHMAARAFLFTFTHHLHLPVSPTEGPEVVEGRRRCFLQEQLGLGEEDS
QILLYLSQLITQQYLQPDTGSSAAAPCFSFNYTTSVLYKI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggcattcactaaagacgatgagtatggacagacaact
cccgacctgtgggctctgcccgaggagttctctgtccctctccatccgcttgctgactcc
aacccctgggctaaaacctcttacgccaagttcaccaaagacttcatcctcatctctgag
ttctctgagcaggtgggccctcagccgctcctcaccatccccgacgaccccaaagtctgt
ggcaccttcgatctcaactacttctccctgcgcatcatgtcagtggactaccaagcctcc
tttgtgggacacccgcctgggagtggctacccaaggctcagctttgtggaggactcgagg
gtggtgctgggtgactcaaaggaaggggcgttcgcctacgttcatcacctcacgctttac
gacctggaggcgaggggctttgttcgaccattctgtatggcctacgtctcagcagatgaa
aggaagatcatgctgcagtttcaggagctgtccctgcgtttctcacaggcctctgagtgt
ctgaaagctgggaacaggagagcgtttgccaaggaactccagaggaagctccaagacctg
gagtacactcactccgtgctgcaaaaggaggagggcctgcagagggaggcgagtcctcag
tgcatgtactccgctcatgctgtcgagaaagccaacgagcttgcgaacgtggagaagagc
atctacgaacacagagacctgctgagacagatcagctcctaccatcaccgcccacgccgc
gatcctcatgctgtcacctgtcagaagtgtgtcactgagtgcttgagcgagtgcgaacag
ctgttagagaaatacgccaagcttgccaaccccttcaaatacgctgacaaagaggagaag
ggggaggaagggcagggtccagttgatgatgaaggaggtgaacaagaagtggacgaggat
gaagatgaagtcattaaacgcaggccctcctacacgccacagctgatcaaagccaagtcc
gcaaagtgttttgacaagcgcctgaagacgctgcaagagctgtgtgacgatacgttctac
gaggccactgttgagctcctgaaggagactgagaggagtttccggggagacctgtgttac
ctgcacacacgccgcctggagagggcgctgtgcaggaaacagagagttaccaacttcctg
tttgaggaggacctcggtggtgatgatgaggaggacgtagggggaacactgagaccattc
tgtgctgtgaaccatgctgtagataactttacactcttaaatccacctcctattgtgctg
ggaccagaacctctagagctacatgtcctggagcctccagaccctctcaaccgtactcaa
gagagtgagctcgggattgcggacaatctggagtcctccccctcggaccagactctggag
acccaggagagctccgaggagaccaaaggaagcttcagcagcgataagagcggggtgggt
cttgccgagatccaacagaatctatcaagtatgaagtcagaagctcctgatcctgattct
gacttgacccctgaccctgatcataacactgacctggagagggagagcagcagtgaggag
atggagaccactgctggggatgatgacggagacgagacacctgtgtctttgctggaggtg
gtgtctgagctggaggctagcagggaggacgagtgtgatggagttactgacggggcttgt
gaggaggagtctgacttgttggttcctttagatacagcatgctgtatggcccaagagggt
ttcctttatgaggcttctgccccggaggcggtgtctcgtcttggccaaagcccccagccg
cagccctgtgaaaccctggtggtcaaccaggagccccaggccctccttccactacaggat
gactacgcggtgggttctccatgctcagacagtcctgcagctgggctcgagctgcctgtc
gggccccttggagatgcggtttcccgtacctcagtggaggatgggtcagactgtaccatg
agtgcttctacagggtctgatcgggctgcttctcctcttggctatgggggagtggtgacc
ctgcgtcagaggaagaaggctggacaaggagccttgaggtttgtgcgacagtaccccttt
gcgatgcaagctctgtggtgtctgctgagcggcaggaccctggtggtgctcggggcagat
gaggggagagtccgcagactggttgctgctctggccctcttcgtgcctggtcctgggaag
tgtggtgagagggttcaagcctggctgtcctgctccttcacccttactgacctgcagagg
tggaaactcattggattgcaaagagtagcctcccctgtgggctccagcatgctttactca
ctgtcccgctacagtcgctacatctccatcctggatgctgaccagaagaccttgcgctgt
ccgccgtatcgtggccaactcctcgccaacatagccgaccaccgcacttacatccgccgt
ggctccacctacttccttcacttacagagcaccctctgtcacatggcagccagggccttc
ctgtttaccttcacccaccacctccacctgccggtcagccccacggaggggcccgaggtc
gtggagggccgacgccgctgcttcctgcaggagcagctggggctgggagaggaggacagc
caaatactgctctacctcagccagctcatcactcagcagtacctacagcccgacaccggg
agcagtgcagcagcaccttgttttagttttaattacaccaccagcgttttatacaaaatc
tga
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