Epinephelus fuscoguttatus (brown-marbled grouper): 125880977
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Entry
125880977 CDS
T08419
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03440
Homologous recombination
efo03460
Fanconi anemia pathway
efo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125880977
09124 Replication and repair
03440 Homologous recombination
125880977
03460 Fanconi anemia pathway
125880977
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efo01009
]
125880977
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125880977
03036 Chromosome and associated proteins [BR:
efo03036
]
125880977
03400 DNA repair and recombination proteins [BR:
efo03400
]
125880977
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125880977
Protein phosphatases and associated proteins [BR:
efo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125880977
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125880977
Multi subunit type E3
BRCC complex
125880977
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125880977
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
125880977
BRCA1-A complex
125880977
BRCA1-B complex
125880977
BRCA1-C complex
125880977
BRCA complex
125880977
FA (Fanconi anemia) pathway
Downstream FA components
125880977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RTT107_BRCT_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-Nse
zf-RING_4
zf-MIZ
zf-RING_6
zf-RING_10
zf-ANAPC11
TRAF3_RING
PTCB-BRCT
zf-rbx1
Prok-RING_4
Sina_RING
RING_ZNF598
Motif
Other DBs
NCBI-GeneID:
125880977
NCBI-ProteinID:
XP_049419805
LinkDB
All DBs
Position
LG20:21810186..21843226
Genome browser
AA seq
1406 aa
AA seq
DB search
MKTPTASDVRKGISLLWETLQCPICLDLMTAPVSTKCDHQFCKFCMTKLLDNTKQNRASC
PVCKTNITKRGLQESPGFQRLVAGLQDMIMAYEHDTGTNYFTGMSQQKGQSGVTDAEASK
RCHDMSLEDTPGSGHDNLENVDSDALPRSHSSTIAAQNGFARLMGLEDTSPLMTQNEGLD
SGLGDAPPMSDRKVHSSTDNLDPAEIDMSEVVENATSTHKTRGKIGSRKLEKASVHLPLT
PDETEHEPLRKSSRKKRKKDSESDKILGEKQKKSLQKVAEWLMKVPTEESLELEKPDEDD
EDSDSSSSASTIDIKQHNIDLNLGRVDRAKALEDQVFGAVYRRGRRGTRAIIPPLNVFAE
PSTTEETRAATQKKNTFTPAAVIEKTSSEDKSGGDIEEEQQMIEKVNETSSDIFKEVEQM
EENDIDNDRKEASNLPESDKDNSKDEDLCPASDIERKQRGRNSKRKRPNTLQQVDSDLQE
QAQSESTEQKKTEKRKCKNMRSEKGKPARVPKPLVLVGVQNGETSPETRPRSEEIQVHIE
NYPSSEDQDIPVARSTRRSRRLQHFVEEVQEGHKKANLKASIAKKDRNVKKQSDEAKDGT
LDQTASPNNGNATKVAERNGCIYDQDLGGIENMESSERAYSAEDVKESIAEVPNAKTLSE
ASSACHVPVVPNSTSPAETAMVGPTFESDTPINHFPNSTQLETFANETKCAETENEEDKN
DSELDTEQLLKSFKATKRKSFHLGGPNVKKSRSLDQENVQGAEAENQIHTKASEITNQEP
SRDHESSACSDLISPSTSPALTRKPVVEKPDQEVVEASIPDSSCSGQDSVGGICVSRNSV
SSALTPNKVSKCETGSPHLSVVPQVVDSGLCFVATEHEELNEPSKCSQIKESQLDCTVRN
AGKGTEIRDVGKHSVGITENVLNTESSLTPDGLGGPVGQTIHEAKSNGCGSGELSSHSSI
KSVPRRKARRLESSSESDCSEEGLPTLKEIFGTAAPPCAVTDDQGDCSGANRCEGEAEQL
SRPPPCPSPDCVNSSQASVDLFGTPDECDAPVNDINVSMESSQFSSEVLVTQQKIEMQKE
LVRLEKLMALVSEVLQEKEDSPAKEAPSKTDRETVPEAEQDSSTRPSDGKGVTQPSVSKQ
HSTAEMAVQRSTHTETSVRGTGATKTSCSSSAVRTLKSNGSPTDGQEDKENNSPPKDRSK
AKMVLASSGLGPNEQIMVKKFAKQVGARVVSQVTPEVTHIIMHTDEQLVCERTLKYFLGI
AGRKWVVSFQWISECFKQKKLLDESVFEVRGDVVNGPNHQGPMRARTTEDNNLLMKGYKI
CFQGPFTDMTTDEMEWMVELCGAAVVKDPLLLDNKQKSHQLVIVQPGSELTSAYSSLSRN
ATVVTRGWLLDTVATYTLQNHNKYTT
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaacagcctccgatgtcagaaaggggatttcactcctttgggagactctg
cagtgccccatatgcttggatttaatgactgcacctgtttctaccaagtgtgaccatcag
ttttgcaaattttgtatgacgaaacttttggacaacaccaaacaaaacagggctagctgt
ccagtgtgtaaaaccaatataaccaaaaggggcttgcaggagagtcctgggtttcagagg
cttgtagccggattgcaggacatgataatggcatatgaacacgacactggcacaaactac
ttcactgggatgtcacagcaaaaaggacaatcaggagtcacagatgctgaagcttctaaa
cgttgccatgatatgtcacttgaagacacacctggcagtggccatgacaatttggaaaat
gttgacagtgatgctcttccaaggtctcactcctcgactatagcagctcagaatggattt
gctagactgatgggacttgaagacacaagtcctttgatgacacaaaatgaaggcctggac
agtggcctcggggatgcaccaccaatgtctgataggaaagtgcacagctctacagataat
ttggacccagcagaaattgacatgtcagaagttgtggaaaatgcaacatcaacacacaaa
actagaggtaaaattggatcccgcaaattggagaaagcctccgttcatctgccattgacc
ccagatgagactgaacacgaacctttaagaaagtcctcgaggaagaagcgtaaaaaggat
tcagagtctgacaagattcttggggagaaacagaagaaaagtctacagaaagtcgctgag
tggcttatgaaggttccaacagaagaaagtcttgagttagagaaacctgacgaagacgat
gaggactctgacagcagctcttccgcttcaacgatagatatcaagcaacacaacattgat
ttgaatctcgggagagtggatcgtgctaaagccctcgaagatcaggtgtttggggctgtc
tacagacgagggcgaagagggaccagggctatcattcctccgcttaacgtttttgctgag
ccttcaacaacagaagaaacacgagcagccacccaaaaaaagaacactttcactcctgct
gctgtcatcgagaaaacaagctctgaagataaaagtggaggcgacatagaggaagagcag
caaatgatagaaaaagtaaatgaaaccagcagtgacatttttaaagaagtagaacagatg
gaggaaaatgatatagacaacgacaggaaagaggcaagcaacttgccagaaagtgacaaa
gacaatagcaaagatgaggatctctgtccagcgtctgatattgaacgaaagcaacgaggc
agaaactcaaagagaaaaaggcctaacactctgcagcaggtcgacagtgatttgcaagag
caggcacagtcagaaagtacagagcaaaaaaagactgagaagaggaagtgtaagaacatg
aggtcagaaaaaggcaagcctgccagagtgcctaaacctcttgttctggttggagttcaa
aatggagaaaccagtcctgagaccagacccaggtcagaggaaattcaggttcatattgag
aattaccccagcagtgaggaccaagatatccctgttgctaggagcaccaggagaagtaga
agacttcaacactttgttgaggaggtccaggaaggtcacaagaaagcaaacttgaaagcc
agtatagctaaaaaagacaggaatgttaaaaagcagtcagacgaagctaaagatggaact
ttggatcaaacagcatcacctaacaatggaaacgcgacaaaggtggctgaaagaaacgga
tgtatttatgatcaagacttaggaggaatagaaaacatggaatccagtgagagagcatat
tcggcagaagatgttaaagagtccatcgctgaagtcccaaatgctaaaactttgtctgaa
gctagttctgcttgtcatgtccctgtggtcccaaactccacaagtccagctgaaacagcc
atggtaggtccaacatttgaaagtgacactccaataaatcatttcccaaacagtactcag
ttggaaaccttcgcaaatgagacaaaatgtgcagaaacagaaaatgaggaggataagaat
gacagcgagctggacactgagcaactgctcaagagcttcaaagccaccaaaaggaaatct
ttccatcttggtggcccaaacgtgaaaaagagccgaagtttggaccaagaaaatgtgcag
ggtgctgaagcagaaaatcagatacacacaaaggcatctgaaatcaccaaccaagagcca
tcaagagaccatgaaagctcagcttgcagtgatttgatatccccatctacatcacctgcc
ctgacaagaaaaccagttgttgagaaaccagatcaagaggtggttgaagcctccatccct
gatagcagttgttcaggtcaggacagcgttggtggtatctgtgtctccaggaatagtgtc
agcagtgccctcactcctaataaagtgtcaaagtgtgaaacaggaagtcctcatctttct
gttgtgccccaagtagtagattctgggctctgcttcgtcgccactgaacatgaggagcta
aatgaaccctcaaagtgttctcaaatcaaagagagtcagcttgattgtactgtgaggaat
gctggcaaagggaccgagataagagacgttggaaaacattcagttggcatcactgaaaat
gttttaaacacagagtcctctttaactcccgatggcctcggaggaccagttggacaaact
atccatgaagcaaagtcaaacggttgtggtagcggagagctcagctcccattcctccatc
aagagcgtgcccaggaggaaggcaaggaggctcgaatcgtcatccgagtcagactgcagt
gaagagggattaccaactctgaaagaaattttcggaacagcagctcctccctgtgctgtg
acagatgatcagggagactgcagtggagctaatagatgtgagggtgaagcagaacagctg
agccgtccacctccgtgccccagccccgactgtgttaactccagccaagcgtctgtggac
ctgtttggcacgccagatgaatgtgatgccccagtaaatgacatcaacgtttccatggaa
tcatcacagttttcaagtgaggtccttgtcacacagcaaaagattgaaatgcagaaggag
ctggtgaggttggagaagttgatggctctggtgtcagaggtgcttcaggagaaggaagac
agtcctgcaaaagaggcgccctcaaaaacagaccgggaaactgttccagaagcagagcaa
gactccagcacaagaccatctgatggcaaaggggtcacgcagcccagtgtgtcgaagcaa
cacagcactgcagagatggctgtgcagcgctccacacacacagagacgagtgtaagaggc
accggagccactaagacgtcctgttcaagttcagcagtcagaacattaaagagcaatggt
tcaccgacagatgggcaagaggacaaagaaaataacagtcctccgaaagatagaagcaaa
gctaaaatggtgcttgcgtcatctggattaggccccaatgaacagataatggtgaaaaag
tttgccaagcaagttggtgcccgtgtggtttcccaggtgacgccggaggtgacccatatc
ataatgcacacagacgaacaactggtctgcgagcgcacactaaagtacttccttggcatc
gcaggcaggaagtgggtggtgagcttccagtggatttcagagtgcttcaaacaaaagaaa
ctcttagatgagagcgtctttgaagtgagaggtgacgtggtgaatggaccaaaccaccag
ggacccatgagagctcgtaccactgaagacaataacttgctcatgaagggctacaagatc
tgcttccagggcccgtttacagacatgactacagatgaaatggagtggatggtggagctt
tgtggagcagctgtagtcaaagatcctcttctcctcgacaataaacagaagtcccatcag
ctggtcattgtacagcccggatcagagttgacgtccgcatacagcagtctctctagaaac
gctacagtcgtgacacgtggttggctcctggacaccgtggcaacctacacactccaaaac
cacaacaagtacacaacatga
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integrated database retrieval system
