Epinephelus fuscoguttatus (brown-marbled grouper): 125882779
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Entry
125882779 CDS
T08419
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125882779 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125882779 (irf5)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
125882779 (irf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
125882779
NCBI-ProteinID:
XP_049422590
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All DBs
Position
LG22:119949..137895
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AA seq
499 aa
AA seq
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MSVQPRRIRLKPWLLAQVNSGRYPGLQWLSPDHRLFQIPWKHATRHTPSSDEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEQSGNI
DAGDDDDEEMPNLMDLSINPRTSDSASFNSFPPHSDVDHFNMSSNGSFGLPHVIPVPLLP
DRGLPMNSDLPMTSDLQAQSGMVDQGSFVHPVGHPNGLQDLSSLPPSAASGPPQPASMEA
SSMGDVQNQGDPQNHQPCKYDLLSSVPLTDLDLKFQYRGRTMGSLTVSNPQGCRLYYGHL
EPTPEQVDLFGPVTLQQVRFPGTSEIQNQKQRFYTEALLDVMDRGLILEIWEQDIYAIRL
CQCKVFWSGPGMPEQGPPNPMEREKKIKVFSLNNFLQGLISFQKGEAQNPPPFEVYFCFG
EDWPDKKPKEKKLIIVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDVKDQTVEQFKE
LQRLLQSQHIQGPWTPNVP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagccccgcaggatccgtctgaagccctggttgttggctcaggtgaacagt
ggcaggtatcctggtctccagtggctcagtccggatcaccgtctcttccagatcccctgg
aaacacgccacacgccacacaccatcatcagatgaggaaaacaccatctttaaggcgtgg
gctctggagacaggtaaatatcaggaaggcgtggacgaacccgaccctgccaagtggaaa
gcaaaccttcgctgcgctctaaacaaaagtcgagagtttcagctaaagtatgacggcacc
aaagaaactccagtgcagccgtacaaaatctacgaggtgtgtgagcagagcgggaacata
gatgctggcgatgatgatgatgaagagatgccgaacctgatggacctcagcatcaacccc
aggaccagtgactccgcctccttcaactcctttccacctcattcagatgtggaccacttc
aatatgtcctccaacgggtcatttggacttccacatgtgatcccagtacctctcctcccc
gacagaggcctccccatgaactctgacctccccatgacctctgacctccaggctcagagt
gggatggtggatcaggggagcttcgtccatcctgtaggacaccctaatggactccaggac
ctgagttctctcccaccttcagctgcctctggtcccccccagccggcttcaatggaggcc
agcagcatgggggacgtccagaaccagggggaccctcagaaccaccaaccctgcaagtac
gacctgctgagcagcgtcccactaacagatctagacctgaagttccagtaccggggccgg
acgatgggctccctcaccgtcagtaaccctcagggctgccggttgtactacggacacctg
gagccaaccccggagcaggtggacctgttcggacccgtcaccctgcagcaggtccggttc
ccggggacatctgagatccagaaccagaagcaaaggttctacactgaggccctgctggat
gtgatggaccgcggcctgatcctagagatctgggagcaggacatctacgccatccgcctc
tgtcagtgcaaggttttctggtctggaccgggcatgcccgaacaaggtccacctaacccc
atggagagggagaagaagatcaaagtgttcagcctcaacaacttcctgcaaggtctgatc
tcgttccagaaaggtgaagctcaaaaccctccacccttcgaggtctacttctgctttggg
gaggactggcccgacaagaaacccaaagagaagaagctcatcatcgtccaggtggtcccc
gtggtggctcggatcctgacagagatgttctcaggagaactcagctggtccaccgacagc
atccgtctgcagatctcgaacccggatgtgaaagaccagacggtggagcagttcaaagag
cttcagaggctcctgcagagccaacacatccaggggccctggacccctaacgtcccctga
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