Epinephelus fuscoguttatus (brown-marbled grouper): 125882885
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Entry
125882885 CDS
T08419
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
efo04145
Phagosome
efo04210
Apoptosis
efo04510
Focal adhesion
efo04520
Adherens junction
efo04530
Tight junction
efo04810
Regulation of actin cytoskeleton
efo04814
Motor proteins
efo04820
Cytoskeleton in muscle cells
efo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125882885 (actb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125882885 (actb1)
09143 Cell growth and death
04210 Apoptosis
125882885 (actb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125882885 (actb1)
04520 Adherens junction
125882885 (actb1)
04530 Tight junction
125882885 (actb1)
09142 Cell motility
04814 Motor proteins
125882885 (actb1)
04820 Cytoskeleton in muscle cells
125882885 (actb1)
04810 Regulation of actin cytoskeleton
125882885 (actb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125882885 (actb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125882885 (actb1)
03019 Messenger RNA biogenesis [BR:
efo03019
]
125882885 (actb1)
03036 Chromosome and associated proteins [BR:
efo03036
]
125882885 (actb1)
03029 Mitochondrial biogenesis [BR:
efo03029
]
125882885 (actb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125882885 (actb1)
04147 Exosome [BR:
efo04147
]
125882885 (actb1)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125882885 (actb1)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125882885 (actb1)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125882885 (actb1)
NuA4 complex
125882885 (actb1)
Chromatin remodeling factors
BAF complex
125882885 (actb1)
PBAF complex
125882885 (actb1)
GBAF(ncBAF) complex
125882885 (actb1)
SWR1 complex
125882885 (actb1)
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125882885 (actb1)
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125882885 (actb1)
Exosome [BR:
efo04147
]
Exosomal proteins
Proteins found in most exosomes
125882885 (actb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125882885
NCBI-ProteinID:
XP_049422797
LinkDB
All DBs
Position
LG3:complement(27454552..27458577)
Genome browser
AA seq
375 aa
AA seq
DB search
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaatcgccgccctcgttgttgacaacggatctggtatgtgcaaagctggc
tttgcaggagatgatgctccacgtgctgtgttcccctccattgttggacgtcccagacat
cagggtgtgatggttggtatgggccagaaggacagctatgtcggtgatgaggcacagagc
aaaaggggcatcctgaccctgaagtaccccattgagcacggtattgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaatgagctgagagttgcccccgaggag
cacccagtcctgctgacagaggctcccctgaaccccaaggccaacagggaaaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtatgtggccatccaggctgtgctg
tccctgtacgcctctggtcgtaccactggtattgtcatggactctggtgatggtgtgacc
cacactgtgcccatctatgaaggctacgccctgccccacgccatcctcaggttggacctg
gctggcagggacctcacagactacctcatgaagatcctgactgagaggggttacagcttc
accaccacagctgagcgtgagattgtgcgtgacatcaaggaaaagctgtgttacgttgca
ctggactttgagcaggaaatgggcactgctgcctcctcttcatccctggagaagagctac
gagctgcctgacggacaggtcatcaccattggaaacgagaggttccgttgccctgaggcc
ctcttccagccctctttccttggtatggagtcttgcggtatccatgaaactaccttcaac
agcatcatgaagtgtgatgtggacatccgtaaggacctgtatgccaacactgtgctgtct
ggaggtaccaccatgtaccctggcatcgctgaccgtatgcagaaggaaatcactgccctg
gcacccaccaccatgaaaatcaagatcattgctcctccagagaggaagtactctgtatgg
atcggaggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggccccagcattgtccacaggaagtgcttctaa
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