Epinephelus fuscoguttatus (brown-marbled grouper): 125883612
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Entry
125883612 CDS
T08419
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efo01009
]
125883612 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125883612 (trpc5a)
Protein phosphatases and associated proteins [BR:
efo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125883612 (trpc5a)
Ion channels [BR:
efo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125883612 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
125883612
NCBI-ProteinID:
XP_049423996
LinkDB
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Position
LG23:7159059..7383995
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AA seq
1090 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSSL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSILYLLVWLHNKLCRRGQPPGDDTHKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRNYSSS
SETAKDDGAVASEDDSESGDGGGGQRSKGVTFMTPLEDDATPSPTLGVSALVRSISGMTR
IEGGGEGEEEELEEGIGWGEEDEEEEGKPKSNGLKTTVIPPSSTTVLPSPSSSFSSTFSS
SLARTRSRLQRLSTPGTKADSFKRLSYLFSRSKRKAPPMPLPLQSPPSYTISDGLLRPLG
THSHSDFGLSDVTRSETHLNEVGRSVDINNPSFSPRRTNGRDSLLTLPLPPPCPCQSLHC
ASNMSESSSRLLDSSEDVFQGGGVGGAREGGVDGGGGRGGVMMIGGWVGPCDDVIEDSCE
VIEDSVTTQL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacatactcgccataccgcgaccgc
atcccgcttcagatcgtccgggctgaggtggagctgtctgcagaggagagggcctacctc
accgccgtggagaaaggtgactatgcgggtgtcaaacatgccctccgggaggcggaggtc
tactacaacatggacgtgaactgcctggacccgctgggccgcagcgcgctcctcatcgcc
atcgagaacgagaacctggagatcatggagctcctgctcgaccacggcatccacacgggc
gacgccttgctctacgccatcaggaaggaggtcgtgggagctgtggagctgctgctgtcg
cacaggaggcccagtggcgagaaacaggttccctcactgatgatggacagtcagttttca
gagttcaccccggacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctcctcgtccagcggaaggtcaccattcccagaccacaccagatacgatgtgac
tgtgtcgagtgtgtatccagttcagaggtcgacagtcttcggcattcaaggtctcgactc
aacatctacaaggctctggcctcaccctccctcatcgctctgtccagtgaagatcccatc
ctcactgccttcagactgggctgggaactcaaagagctcagcaaggtggagaatgagttt
cgtcaggaatacgaggagctgtcgcagcagtgcaagcggttcgccaaagaccttctggac
caggccaggagttctagagagctggaaaccatcctgaaccacagagacaacgaccagagc
gaggaactagaccccaggcagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagtttgtggctcagcccaactgccagcagctgctggcaacactgtggtac
gacggcttcccgggctggaggagacgacactgggccgtcaaactggtcacctgcttcatc
atcggactcctgtttcctgttttctcactgatctacctgttggctccgaagagctctctg
ggacgcttcatcaagaagcctttcatcaaattcatctgtcacacggcgtcctacctgact
ttcctcttcctcctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcag
ggacctccacccaccatcgtcgagtggatgatcctcccatgggtgctggggttcatctgg
gcggagattaaggagatgtgggacgggggattcacagagtacatccatgactggtggaac
ctgatggactttgccatgaactctctctacctggccaccatatcactgaagatcgtggcc
tacgttaagtataactcctctcgtcccagggaggagtgggagatgtggcatcccacgctg
atagcggaggctctgttcgccatcgccaacatcttcagctcactcagactcatctccctc
ttcaccgccaactctcacctcgggcccctgcagatctcactggggaggatgctgctggac
atccttaagttcctcttcatttactgtctggtcctgctggcgttcgccaacggtctgaac
cagctgtatttctactatgagacaaaggcctcagaggaacccaacaactgcaagggcatc
cgctgtgagaggcagaacaacgccttctcaacgttatttgagactctccagtctctgttc
tggtcgatattcgggctgctgaacctgtacgtcaccaacgtgaaggcccggcacgagttc
accgagttcgtcggggcgaccatgttcgggacgtacaatgtcatctcgctggttgttctg
ctcaacatgctcatcgccatgatgaacaactcctaccagctcatcgctgaccacgccgac
atcgagtggaagtttgcccgcactaagctgtggatgagttactttgacgagggcggcacg
ctgccgcctccgttcaacatcatccccagccccaagtccatcctgtacctgctcgtgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggggacgacacacacaaatgtgaa
aacctccgagagttcaccgaacgccacgccgacagtctgatacagaatcagcattaccag
gaagtgatccggaacctggtgaagaggtacgtggcggccatgatacgcagcgccaagacg
gacgagggactgacagaggagaactttaaggagttgaagcaggacatctccagtttccgc
tacgaggtcctggatctcctcggcaaccggcgtcctccccggcgaaattactcctcctca
agtgagacagcaaaagacgatggcgccgtggcctcagaggatgacagcgaatcaggcgac
ggcggcggaggccagaggtcaaagggcgtgaccttcatgaccccgttggaggacgacgcg
acgccgtcaccgacgcttggtgtgtccgccttggtgcgctccatttctgggatgacccga
atagaaggagggggagagggggaggaggaggagctggaggagggcattggatggggggaa
gaggacgaggaagaggaggggaaaccaaagagcaacgggctgaagacgaccgtcatccct
ccgtcctccaccaccgtcctcccctccccgtcttcgtcattctcctcaaccttctcctca
tcattagctcgcacgaggagccgcctgcagcgcctctccactccaggaacaaaggcggac
tctttcaagcgcctctcctacctgttctcacgctccaaacgcaaagccccacccatgcct
ctccccctccagtccccgccctcatacaccatctctgatgggttgctccgccccctggga
acccacagccactccgacttcggactcagtgacgtgaccagaagcgagactcacctgaac
gaggtgggccgctcagtcgacatcaataacccctcgttctccccgcggagaacaaacggg
cgggactccctcctgacgctgcccctccctcccccttgcccctgccaatccctgcactgt
gcttccaacatgtccgagtccagctcgcgcctcctggactccagcgaggacgttttccag
ggcggaggcgtgggtggagcgcgcgagggcggtgtggatggaggagggggaagaggaggg
gtgatgatgattggcgggtgggtgggaccctgcgatgatgtcatagaggacagctgtgag
gtcatagaggactctgtcaccacgcagctatag
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integrated database retrieval system
