Epinephelus fuscoguttatus (brown-marbled grouper): 125887227
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Entry
125887227 CDS
T08419
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04260
Cardiac muscle contraction
efo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125887227
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125887227
04261 Adrenergic signaling in cardiomyocytes
125887227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125887227
Ion channels [BR:
efo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125887227
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
DUF2201
MCP-like_PDC_1
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
125887227
NCBI-ProteinID:
XP_049429854
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Position
LG4:complement(22723176..22809708)
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AA seq
1084 aa
AA seq
DB search
MDTCRVRVWLFLVLLWQDGSLASQFPTQLMIKEWVDQMQKELVTLADTATAGKSLTQIFL
RNQHLYSVEQNDAEELVARAARKIEQLLRKRSAALEKLATAAENFQMAHQWKDEFEGDEI
SYYNAKDNLDANETEGRKYRIRPDFKEDLSFKRLTDHNHTAVHIPTDIYDGSTIVLNELN
WSEALEDVFRKNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNTRVKKTACF
DHLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFKQLSATNVSRANCNKIIMLFTDG
GEERAQAILEKYNADKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADKQAKQVQWTNVYLDALELGLVITGTLPVFNKTKTKDDRNGEHQNQL
ILGVMGIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFL
DAELENDIKVEIRRMMIDGETGERTINTLVKTQDERYIDRGVRTYTFALVNGTDYSLALV
LPKYSEHFIQAKLGDDIQKAMSSSWGKEAMETLQQERFDEFGYTFIAPRDYCKDLKLSLN
NTQFALDFSQYLDRNAPDACNVSLVNRLILDAGLTAELVKLWNEQTVDGIVARFVATDGG
ITRVLPRSAGEEWTENLETYESSFYKRTLDNEIYIFTAPYFNPEGREPVSESGILVSKAV
DLTIDEVTLKPAVVGVKLNVSFWMNSFINATLKLNCKDEICGCLRNDKHVDCVILDDGGF
LLMSNQEEYLTLIGQFFGEVDPVLMINLVNTSLYSFNKTYDYQSVCDPEKDSKAAAGPRS
VFVPTIADLLSIGWWASSAAWSILQQLFFSLMFPDLLEAAESADDEIPDAMFKESCITEQ
TQYFFDNDERSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKATCLSCDPRPLRQAEQP
SEGPDPCELAQNPRHRKGPDVCFDNNENEDDSDCGGGTCLSPCLWPMLGLQLLLLWLITS
LQHS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgcagggtacgagtctggctgtttctggtcctgttatggcaggacgggtct
ttggcatcgcagtttccgacacagctcatgattaaagaatgggttgatcagatgcagaaa
gagcttgtcaccctggcagacacggccacagctgggaaaagcctcactcagatttttctg
agaaaccaacacctgtactctgtggagcaaaacgacgcagaggagcttgtggccagagca
gccaggaaaattgaacagctgctgcggaagaggtctgctgccttggagaaactggccaca
gctgctgagaacttccagatggcgcatcagtggaaagacgagtttgagggtgatgaaatc
tcctactacaacgcgaaggacaatctggatgcaaatgagacagaaggaaggaaatacagg
attcgaccagactttaaagaggacctgtcatttaaacgtttgactgatcacaaccacacg
gctgtccacatccccactgacatctatgatggctccaccattgtgctgaatgagctaaac
tggtcggaggcgctggaggacgtgtttagaaagaacagagaggatgacccgacccttctg
tggcaggtgtttggtagcgctacgggactggctcgctactatccagcttccccctggatg
gatgctcgcaagacccccagtaaaattgacctgtatgatgtccgcaggaggccgtggtac
attcaaggagctgcctcacccaaagatatgctaatcctcgtggatgcaagtgggagtgtg
tctggcttgactctcaaactgatcaggacctctgtcagcgagatgctggagactctgtct
gatgacgactacgtcaatgtagtttattttaacacccgagtgaagaagacggcctgcttt
gaccatctggttcaagccaacgtgaggaacaagaagctgctgaaggatgctgttcagaac
atcacagctaaaggaatcacaaactacacaaaaggctttgagtttgctttcaagcagctc
tctgcgactaatgtgagcagagcaaactgcaacaagatcatcatgctgtttactgacgga
ggagaggaaagagctcaggccatactggagaagtacaatgctgacaaaaaggtgaggatc
ttcaccttctcagtcggacagcacaactatgataaaggacccattcagtggatggcctgt
tccaacaaaggttacttctatgagattccgtccattggagccatcagaataaacacacag
gagtatctggatgttctgggaagaccgatggttctggcagacaagcaggccaaacaagtc
cagtggactaacgtctaccttgatgctctggaactgggtctggtcatcactggaacccta
cctgtattcaataaaacgaagaccaaagatgacaggaatggcgagcaccagaatcagttg
attcttggcgtaatggggatcgacgtgtctctggatgacatcaagaagctcacaccacgc
ttcacaatcggtccaaatggatactactttgccattgatcccaatggctacgtcctgctg
caccccaatctccaaccaaagaatcctaaattccaggaacctgtgacgctagacttcctg
gatgctgagctggagaatgacatcaaagtggagatcaggagaatgatgatcgatggtgag
acaggcgaacgcaccatcaacactctggtgaaaactcaggatgagaggtacatcgacaga
ggagtcaggacctacactttcgcgctggtcaatggaacagattacagcctggctcttgtt
ctgccgaaatacagtgaacacttcattcaggctaaactgggggatgacattcagaaagct
atgtcttcttcttggggcaaagaggccatggaaaccctacagcaggagaggtttgatgag
tttggttacaccttcatcgctccaagggattactgcaaagacctgaagctgtcactcaac
aacacccagtttgccctcgacttcagccagtatcttgataggaatgctccagatgcatgt
aatgtgtccctggtgaatcgactaatcctggatgcaggtctgacagctgaactggttaaa
ctttggaacgagcagacagtggatgggatagtggccaggtttgtagccacagatggagga
atcacaagagtcctcccaagaagtgctggggaagagtggactgagaatcttgagacatac
gagtccagcttctacaaaaggaccctggacaatgaaatttatattttcacagctccatat
ttcaacccagagggcagggagcctgtttctgagtcagggattctagtgagcaaagcagtg
gacctcacgattgatgaagtcacgctcaaaccagcagtggtgggagtgaaactgaatgtc
tcattctggatgaacagtttcataaatgctacacttaaactcaactgtaaggacgagatc
tgtggctgtctgaggaacgacaagcatgtagactgtgtgatccttgacgatggcggattt
cttctcatgtccaaccaagaagagtatctcaccctgataggtcagttctttggcgaggtg
gatcccgtgctgatgatcaacctggtcaacacctccctgtactccttcaacaagacctat
gactaccagtcagtctgtgacccagaaaaagacagcaaggctgcagcaggaccacgctcc
gtctttgtgcctaccattgcagacctactcagtattggctggtgggcctccagtgctgcc
tggtcgatactccagcagctcttctttagtctcatgttccccgaccttctagaagcagcg
gagtcagcagatgatgaaataccagatgccatgtttaaggaaagctgcatcacagagcag
actcagtacttctttgacaatgatgaaagatcctactcaggtgtcctggactgtggaaac
tgctccaggatgtatcgcgctgagaagctgccaaacaccaacctagtgttcctgatcacc
gatgccaaggcaacgtgtttgtcctgtgaccccaggccgctacgacaggctgaacaaccc
tctgaaggtccagatccatgcgagctggctcagaaccccagacaccgcaaagggccggac
gtgtgtttcgacaacaatgaaaacgaagatgactctgactgtggaggagggacctgccta
agcccgtgtctttggccgatgcttgggctccaactactgctgctgtggctcattacatct
ttacaacactcatga
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