Epinephelus fuscoguttatus (brown-marbled grouper): 125887260
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Entry
125887260 CDS
T08419
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125887260
Ion channels [BR:
efo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125887260
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125887260
NCBI-ProteinID:
XP_049429902
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Position
LG4:38277332..38316519
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AA seq
1695 aa
AA seq
DB search
MGSRKMSFFETWRSKTERGELLQRANQLRLLPSQLEQLLGDSGVRAELQNTRIASLLPPV
GTEVFRRLTPASLEEIQQRHEAEEKERPKKKKKNEKVAKSDLPKPASDLEAGKQLPFFFG
APPPELLNTPLEELDPYYQSKKTFIVLGKGNIIHRFNAESACYLLSPFNLLRTAAIKIHI
HLLFRLFILVTVLTNCVFMTMSNPPEWRETAEHVFTAIYMLEVLIKMMSRGLCFGSFTFL
RDPWNWLDILVILTGVRPFMESRLYYFNFFRAPKKWLNSMIAGKIYLTWIVSIKTLSVLR
TVTRVLKIITVIPGLKKTVGDVVQSLRKLADVITLTVFWLCLLALITLQLFMGSLKHKCI
ISSWLAPAGSTEFDFSEHVLNAENQYHLPGQLDPLVCGNSSDSGACPEGYTCLRAGRNPN
YGYTSYDSFSWSLLNMVRLMTQDFWENLMQLTFRSSGSHFLVFFMGIVFPGCFCVLSLIV
VVVAMAASEREDAGVVEAREREELFTKIVEVLKRREEEEKAACRAALSETSEGENKSHKH
TDVKDFCLKLDCCVCCPGLQQWLHTFITNPFFDLGIVICLIINTIFMAMEHYPMTMEFEE
HLAIAHLVFTGIFTAEMIIKLVAMGPCGYFKVHWNIYDSIIVIVSLLELGLADVSGLGLL
RPLRLLRVFRLSRWWPSFHLLLKIIWMSLSALRNLTLLLLIMVFFFTVVGMQLFGSDYKD
CVCRISVDCELPRWHMNDFFHSFLAIMRVLYGEWIELMWDCMEVSGQTMCLIFFMMVMVI
GNLLVLNLFLTLLMSSFSSESLAAPAVKEYNHLQPAISQIKRAVWTLLGKKTHMNPDHKA
IDSKDDKKKDYMALTVVTSEQPMSEVRALSSDHDNPTSKDHNTDSQCVLDAIKTSEDEDE
KEKKKHPEVQQRKDDEDDKGNPPDDCCSDKCYRCCPCLDIDTSQGGGRVWSSFRRACCSI
IQHKYFEYFVMFILLLSSAAMMFEDIYLHQRLVLKEILLRADQVFTLLFLIEMLLKIIAF
GLKKYFTDAWCWLDFLILDVFLVSLAADTFGFSELGAIQSLRTLRALGPLRILSRTKGLR
LVVQTMVRSFPFLFDVLLVSLVVWLIFSVSGVELFAGKFYYCFNETSEEIFTADAINNRT
QCLELVMMNFTEVRWKNAHLNFDSVANGYLALLHLALSSDFYDVMYAAVDSRWVESQPVY
ENSLYMYMFFIFFIIISSFFTLNFFIRAILDNLQRSKSAGKHIFITEEQHKEWIAVKKRL
RTPPRAVPRPQNACQAWLFDLVTKLPFNIFMAIVICLNVVLLMVETDQISMQAEIILYWS
HLVFILIFLIEFILKIIALRQHYFTDGWNVLDFLVLIFTIVGMFLADLFEKYFISPSLVT
VLRLFRVGRMLPLIRFSRGIRKLLFAFMMSLPAFINIGLLLFIIMFTSSLFGMFNFAYAR
RGAAIDDMTNFETFWNSMSCLFVMTTTASWGGLLLPLMTTPPDCDPHMEHPGSTVKGDCS
NTTVAIIFFVIHIILSFLLVVHLFVAVVLQTLKSEDGEPLSDDELQMFYETWRKFDPEAS
QFISYSKLSDFCDSLKDPLRIPKPNSIKLIHMDLPLMPGDKIHCVDVLFALSTQVLGYSG
QADTLKARIEEKFVDNPSKVSHEPNSSTLQGKQEDVAAAVIQRAYRKHILQHRGAEEPAV
ESVNGGGGVSGGALQ
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagaaaaatgtccttttttgagacatggaggagcaagacggagagaggagaa
cttctgcagagagccaatcagctgagacttcttccttcacagctggagcagttgctaggt
gacagtggagttcgggcagagctgcagaataccaggattgcgtctctgctgccccctgtt
ggtacagaggtcttcagacgactgacaccagcttcactggaggagatacaacaacggcat
gaagcggaggagaaggagcgaccgaagaagaagaagaagaacgaaaaggtggcgaagagt
gacctgcccaaaccagccagtgacctggaggcagggaagcaactcccattcttctttggg
gccccacctcctgagcttctgaacaccccactggaggagctggatccctactaccaatca
aagaagacgttcatcgtgctcggtaaaggaaacatcatccacaggtttaatgctgagtcg
gcctgttacctgttgagtccattcaacctgctgaggaccgccgccatcaagatccacatt
cacttgttattccgtttgttcatcctggtgacggttctgaccaactgtgtgttcatgacg
atgagtaatcctccagaatggagagagactgcggaacatgtgtttacagccatctacatg
cttgaagtcctcataaagatgatgtccagaggcctctgtttcggaagcttcactttcctc
agagacccctggaactggctcgacatcctggtcatcctcacaggtgtccgaccttttatg
gaatcaaggttgtattacttcaatttcttcagagcccccaagaagtggctgaactccatg
atcgccggcaagatatatttgacatggattgtatctataaagacactttctgtgttgaga
acagttactcgagtactgaagatcatcacagtcatcccaggtctgaagaagactgtcgga
gatgtcgtccagtcgttgaggaaactggctgatgtcatcactctaacggtgttctggctc
tgcctcttggctctgatcactctgcagctcttcatgggatctctgaagcacaaatgtatt
atttcatcgtggctggcgccagcaggaagcactgagtttgatttctctgagcatgttctc
aacgctgagaaccagtaccacctgcctggtcagttagatcctctggtgtgtggaaactcc
tctgattcaggggcctgtcccgagggttacacctgtctgagggcggggagaaacccaaac
tacggctacaccagctacgattcgtttagttggtctctgctgaacatggtccgactgatg
acccaggacttctgggaaaacctgatgcagctgacgttccgatcatcaggttcccacttc
ctggtcttcttcatgggtattgtcttccccggctgcttctgcgtcctcagcctcatcgtg
gtggtggttgccatggccgccagtgagcgggaggacgccggtgtcgttgaagccagagag
agagaagagttgttcactaagatcgtggaggtgctgaagaggagggaggaagaggagaag
gcagcctgcagggcggcgctctcagagacatcagagggtgaaaacaagagccacaaacac
actgatgtaaaagacttctgcctgaagttggactgttgtgtctgttgcccggggctccaa
cagtggcttcacaccttcatcacaaacccattctttgaccttgggattgtcatctgcctc
atcatcaacaccatttttatggctatggagcattatccaatgacgatggagtttgaagag
caccttgctatagcacatctggtcttcacaggcatcttcacagctgagatgatcatcaag
cttgttgccatgggcccgtgcggatacttcaaggtgcactggaacatctatgacagcatt
atcgtcatagtgagtctgttggagttgggattagctgacgtttctggcctgggtctgctg
cgccccttacgactgttgcgagtattcaggctgtccaggtggtggccatccttccacctg
ttgttaaagatcatctggatgtcactgagcgctctgaggaacctgactcttcttctgctc
atcatggtctttttcttcaccgtggttggcatgcaactgtttgggagtgactacaaagac
tgcgtctgtcgcatctcagtggactgtgagcttcctcgctggcacatgaacgatttcttc
cactccttccttgctatcatgagggtcctttatggagagtggattgagctcatgtgggat
tgcatggaggtctcaggtcagaccatgtgtctgatcttcttcatgatggtcatggtcatc
ggaaacctcttggtcctgaatctgttcctgaccttgctgatgagctccttcagcagtgag
agtctggcagctccagcagtaaaagaatacaaccacctgcagcctgctataagtcagatc
aagagggctgtgtggactctgctgggaaagaagacccatatgaacccagaccacaaagca
atcgacagcaaggacgacaagaagaaggattacatggccttgactgttgtgacctcggaa
cagccgatgtcagaggtcagggccctcagcagtgatcacgacaacccgaccagcaaagac
cataacaccgactcccagtgcgtcctggatgccataaagacgtctgaagatgaagatgaa
aaagagaaaaaaaaacatcctgaagtccagcagcgcaaagacgatgaagatgataaagga
aacccacctgacgactgctgtagtgacaagtgttaccgttgctgtccatgcctggacata
gacacatcccagggtggaggaagggtctggtccagcttcaggagagcctgttgctccatc
attcaacacaaatacttcgagtacttcgtcatgttcatcctcctgctgagcagtgcagct
atgatgtttgaggacatttacctgcatcagcgtctggtcttaaaggagatcctgttgaga
gcagaccaggtgtttaccctgctgttcctgatagagatgcttctcaagatcatcgccttc
ggactcaagaaatacttcaccgacgcctggtgctggctcgacttcctcatcttagacgta
tttctggtttctctggcagccgacacatttggattctctgaactgggagccatccagtct
ctgaggaccctgagggctctggggcccctgaggatcctgtctcgcaccaagggcctgagg
ctggtggtgcagacgatggtgcggagcttcccgttcctgtttgatgtgttgctggtctct
ctggtcgtctggttgatcttcagtgttagtggagtggaactgtttgctggaaagttttat
tactgcttcaatgagacatcggaggagattttcacagcagacgctatcaacaatcgtacc
cagtgtttggaactggtaatgatgaacttcaccgaggtcaggtggaagaacgcgcactta
aacttcgacagcgtggcaaatggttacctggcgctgctgcacctggcgctgtcatcagac
ttttatgatgtcatgtacgcggctgtggactccagatgggtggaatctcagccggtctat
gagaattcgctgtacatgtacatgttcttcatctttttcatcatcatcagttctttcttc
accttaaacttcttcatcagagccatcttggacaacctgcagagaagcaagtctgcaggt
aaacatattttcatcacagaggagcagcataaagagtggattgctgtgaagaaacgtctg
cggacccctccgagagctgttccaagacctcagaatgcttgccaggcttggctctttgac
ctggtgactaaactaccatttaatattttcatggcgattgtgatctgcctgaacgtggtt
ctcctgatggttgagacagaccagataagcatgcaggcggaaatcatcctgtactggtcc
cacctggtcttcatcctcatcttcctcattgagttcattctgaagatcattgcgctcaga
cagcactacttcaccgacggatggaatgtgctcgacttcttagtgctcatcttcaccatc
gtaggcatgttcttggctgatttatttgagaaatacttcatctcaccttctctcgtaact
gtgctccgattgtttcgtgttggacgtatgctccctctcattcgctttagcaggggtatc
cggaagctgttatttgccttcatgatgtcacttcctgccttcatcaacattggcctcctc
ctcttcattatcatgttcacctcctctctctttggcatgtttaactttgcctatgcgagg
agaggggcagcgattgatgacatgacgaactttgaaacgttttggaacagcatgagctgt
ttgtttgtgatgaccacgacagcgtcatggggtggtctgctgcttccattgatgaccacg
ccgccagactgtgacccccacatggagcacccaggatccacagtcaaaggggactgcagc
aacacaacagtcgccatcatcttcttcgtcatccacatcatcctgtcctttctgctggtg
gtccacctgtttgtcgctgttgtcctgcagaccctcaagtcagaggacggagagccactg
agtgacgatgaactccagatgttttatgaaacctggagaaagtttgaccccgaagcctcg
cagttcatatcctacagtaagctgtcagatttctgcgactctctgaaggatcctctgagg
attccaaaaccaaactccattaaactaatccacatggatctgcctcttatgcctggagac
aaaatccactgtgtggacgtccttttcgcactctccacgcaggtgttaggttactctgga
caggcggacactctgaaagccagaattgaggaaaagttcgtagacaacccatccaaggtg
tcgcatgaaccaaacagcagcactctgcaggggaaacaggaagacgtggcggcagcagtg
atccagagagcgtacaggaaacacattctgcagcacagaggtgcagaggagccggcagtg
gagtctgtgaacgggggtggtggtgtttcaggtggagccttacagtaa
DBGET
integrated database retrieval system
