Epinephelus fuscoguttatus (brown-marbled grouper): 125891663
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Entry
125891663 CDS
T08419
Symbol
tardbpa
Name
(RefSeq) TAR DNA binding protein, like isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125891663 (tardbpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125891663 (tardbpa)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125891663 (tardbpa)
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GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RRM_11
Me-amine-dh_L
Motif
Other DBs
NCBI-GeneID:
125891663
NCBI-ProteinID:
XP_049437025
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Position
LG7:20744043..20751439
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AA seq
396 aa
AA seq
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MSELYIRVAEDENEEPMEIPSEDDGTILLSSVAAQFPGACGLRYRNPESQCMRGVRLVEG
VLHAPENDWGNLVYVVNYPKDNKRKMDEIDAASAVKVKRGFQKTSDLIVLGLPWKTTEQD
LKDYFTTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQTKVIAQRHMIDGRWCDCKLPN
SKACPDEPMRSRKIFVGRCTEDMTTDELRQYFMQYGEVTDVFIPKPFRAFAFVTFADDQV
AQALCGEDLIIKGISVHISNAEPKHNNSRQMMDRGRFGAGGFSQGYGSNRGGLGSGSGGV
NFGALGLNPAMVAAAQAALQSSWGMMGMLANQQGVSTTAGTATTTRDQTYSSSSTSYSSP
SSASLGWAAGTNTPSSGGFSSGFGTAMESKSSSWGM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagttgtacattcgtgtggccgaggatgaaaacgaggagcccatggagatcccc
tcagaggacgacgggactatcctgctgtcctcggtagcagcacagttcccaggggcgtgc
gggctgcggtacaggaacccagagtcccagtgcatgaggggagtccggcttgtggagggt
gtcctgcatgcacctgagaacgactggggaaacctggtatatgtcgtcaattaccccaaa
gataacaaaaggaagatggatgaaatagacgctgcctcagctgtgaaagtaaaaaggggc
tttcagaagacgtcagatcttattgttctcgggctgccgtggaaaactactgaacaagac
ctgaaagattatttcactaccttcggggaggtcatcatggtgcaggtcaagagagatcta
aagaccggcaactcaaaagggtttgggtttgtccgattcaccgactatgagacgcaaacc
aaagtgattgctcagagacacatgattgatggacgatggtgtgactgcaaacttcccaac
tcaaaggcatgtcctgatgagcccatgcggagccgtaaaatctttgttggccgctgtaca
gaggacatgacaactgatgagctaaggcagtacttcatgcagtatggcgaagtcactgac
gtcttcatccccaaacctttccgggcatttgcatttgtcacatttgccgatgaccaggtt
gcccaagccctgtgtggagaggacttgatcatcaagggaatcagcgtgcacatctccaac
gctgagcctaaacacaataatagtaggcaaatgatggatcgagggcggtttggggctggt
gggttcagtcagggctatggcagtaatcgtggtgggctaggcagcggtagtggtggggtt
aacttcggggctctgggtcttaacccagcaatggtagctgctgcccaggcagcactgcag
agcagttggggaatgatgggcatgctggctaaccagcagggtgtgagcacgacagcaggc
acagccactacgacccgagaccagacctatagctcttccagcaccagttacagcagcccc
agctcagctagcctcggttgggctgcaggcactaacaccccctccagcgggggcttcagc
tctggctttggcactgctatggagtctaagtcttctagttgggggatgtag
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