Epinephelus fuscoguttatus (brown-marbled grouper): 125894963
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Entry
125894963 CDS
T08419
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04020
Calcium signaling pathway
efo04510
Focal adhesion
efo04518
Integrin signaling
efo04540
Gap junction
efo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125894963 (pdgfrb)
04020 Calcium signaling pathway
125894963 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
125894963 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125894963 (pdgfrb)
04540 Gap junction
125894963 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125894963 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
efo01001
]
125894963 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
efo04090
]
125894963 (pdgfrb)
Enzymes [BR:
efo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125894963 (pdgfrb)
Protein kinases [BR:
efo01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125894963 (pdgfrb)
CD molecules [BR:
efo04090
]
Proteins
125894963 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
RIFIN
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
DUF3586
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
125894963
NCBI-ProteinID:
XP_049442682
LinkDB
All DBs
Position
LG9:25343030..25377916
Genome browser
AA seq
1097 aa
AA seq
DB search
MASKLHLTVTVTAALLYFCTELCCLEITPSDKELVLTEGSSLTLTCSGSGETTWEFKRDD
VPYFQVQNGGQSYEIVQSSSTSSVLKLKDVSWRHTGVYQCIDQHNGETKEVAVFVPDPDM
WFIESSHGMVTKTSEESTIPCVVTNPSINVTLYERDTDLPISGHYVPSEGYKALLEDRNY
VCRGELNGEVKESQSFYVFSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSW
DIPNREIINVEPLTDVLPDMSMHSCLIFPRATIAHSGNYICHVHEDIQGQSASASINITV
LERGFVDVKVPQHQNISAKLQENVELRVEIEAYPTPQVRWIKDGATIKGDKPITTRQEHE
IRYVTILTLVRVRTEQKGLYTVLVTNGDDTKEVTFDLEVQVPSQIKDLTDHPLPGKRHMV
TCVAEGVPTPTIQWYSCDSMHKCSNQTAMWQLLTPEPEVLSIQTNASYSKTRKTSQVRSQ
VTFHKLQHVTVRCETTNQAGLFDRRDVKLVSSTLYSQVAVLAAVLALVAIIIISIIILIA
VWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGSGAFGRV
VEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKH
GPLYLVTEYCRYGDLVDYLHRNKHTLLQYYAEKNQDDSCLISRGSTPLSQRKGYVSFGSE
SDGGYMDMSKDEPSLYVPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGGGRLDLAISDS
SVLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDS
NYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYS
ALKRGYRMAKPVHASDDVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLADSYKKKYNQVND
NFLKSDHPAVARTKPRLSSPFPIANPAFGSPSPPYIPPDPYNQSPSPREFTQEADTQEVI
TSYNEYIIPIPDPKPEDVFTDVPSESPASSLVLEEETDSLSQDTADTLPEEDRLEETSER
DALLGSSGTPEVEDSFL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagctccatctgacagtcacggttacagcagcgctgctgtatttctgcacc
gagctctgctgtctggagatcacacccagtgacaaagagctcgtccttactgagggctct
tctctcaccctcacctgctccggctcgggggaaacgacgtgggagttcaaaagagacgat
gtgccgtacttccaagttcaaaatggtgggcaaagctatgaaatcgtgcaaagcagttcc
acgtccagtgttttgaagttgaaggacgtgagttggaggcacacaggggtgtatcagtgc
attgatcaacacaatggagagactaaggaggtggctgtttttgttccagaccctgatatg
tggttcatagagagctcccatggcatggtaacaaagaccagtgaggagagcaccatcccc
tgtgtggtcaccaatcccagcatcaatgtcaccctatatgagagggacaccgatctgccc
atcagtgggcattatgtccccagtgaggggtacaaggcactgctggaggacaggaactac
gtgtgccgtggagagctgaacggggaggtgaaagagtctcagtccttctacgtcttcagc
attgttgtcccagaggccattgacgcctacatcaatgcgtcaaagaccgtcctgaagcag
ggcgaaccgctgacagtaaactgcacggtgcacggagtggagctggtgtttttttcctgg
gatatccccaacagagagattattaacgtcgagccgctgacagacgtcctgcccgacatg
agcatgcactcctgcctgatcttccctagggccacgattgcccacagcggaaactacatc
tgccatgtccacgaggatatccaaggccagagtgcctctgccagcatcaacatcaccgtg
ctcgagcgaggtttcgtggatgtgaaagttcctcagcatcaaaacatttctgcaaagctc
caagagaacgtggagctgagagtggagattgaagcctaccctacccctcaggtccgctgg
atcaaagatggcgccaccatcaagggagacaaacccatcacaaccagacaagagcatgag
atcaggtatgttactattctcaccttggtgagggtgagaacggagcagaagggcctttac
actgtccttgtcacaaacggagatgacacaaaggaggtgacctttgacctggaggtccaa
gttccctctcagattaaagacctgactgaccaccccctgcctgggaagagacacatggtg
acctgcgtagccgagggggtcccaaccccaactatccagtggtacagctgtgacagcatg
cacaagtgtagcaaccagacagcgatgtggcagctgctgacaccggagccagaggtgctg
agcatccagaccaacgccagctacagcaagactcgtaaaaccagccaggtgcggagccag
gtgaccttccacaagctccagcacgtcacggtgcgctgtgagaccaccaaccaagcagga
ctctttgacagaagagacgtcaaactggtgtccagcacgctgtactcccaggtggcagta
ttggctgctgttctagccttggtggccatcattatcatatccatcatcatcctcattgct
gtgtggaggaagaaacctcgctacgagatcaggtggaaggtgatagaatctgtgagccag
gacggtcatgagtacatctatgtggaccccatccacctgccctatgacctggcctgggag
atgccgcgagacaacctggtgctgggtcgcactcttggatcaggagcctttggcagagtg
gtggaggcaaccgcatatggtctcactcattcccagtccagcacaaaggtggctgtgaaa
atgctgaaatctacagccaggaggagtgagactcaggctctgatgtcagagttaaagatc
atgagtcacctgggtcctcacctcaacatcgtcaacttgctgggagcttgcaccaaacat
ggccctctgtacctggtgaccgagtactgtcgctatggcgatctggtggactacctgcac
aggaacaagcacaccctcctgcagtactacgctgagaaaaaccaagacgacagctgcctc
atctctagaggaagcactccgctgagccagaggaaaggctacgtgtcctttggaagtgag
agtgatggaggatacatggacatgagtaaagatgagccctcactctacgtgcccatgcag
gagcagattgacaccatcaagtatgcggacatccagccgtccccatatgagtctccctac
cagcaggacatctaccaggagcaaggtggcggcagattggacctggccatcagtgactct
tctgttctcacctatgacgacctgttgggcttcagctaccaagttgcgaaggggatggag
ttccttgcctccaagaattgcgtccatcgtgacctcgctgcccgtaatgtgttgatctgc
gagggcaagctggtgaagatctgcgacttcggcctggccagagacatcatgcatgattcc
aactacatctccaaaggcagcaccttcctgcccctgaagtggatggcaccagaaagtatt
ttccataatttgtacaccaccctgagcgacgtgtggtcatatggcattcttctttgggag
attttcacactgggaggaaccccctaccctgatttgcccatgaatgagttgttctacagc
gctttgaagagaggctaccgaatggccaaacctgtccatgcctcggatgacgtttacgag
atcatgaagaagtgctgggacgagaagtttgagaagaggcctgagttctccttcctggtc
cacagtgtggggaacatgttggcagacagctataaaaagaaatacaaccaagtcaacgac
aacttcctaaagagtgaccaccctgcagtcgcccgcaccaaacccagactctcctcaccc
tttccgatcgccaacccagcatttggctccccatctcccccctacatccccccggacccc
tacaaccagagcccgagccccagggaattcacacaagaggcagacacacaggaagtcata
acttcgtacaacgaatacatcattcccatcccagaccccaagccggaggatgttttcact
gacgtgccgtcagaaagccctgcaagctctctggttctggaggaggagactgactccctg
tcgcaggacactgctgacaccctcccagaggaggacaggctggaggagaccagcgagaga
gacgctctgctgggatcttctgggacgcccgaggtagaagacagtttcttgtag
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