Epinephelus fuscoguttatus (brown-marbled grouper): 125894963
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Entry
125894963 CDS
T08419
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04020
Calcium signaling pathway
efo04510
Focal adhesion
efo04540
Gap junction
efo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125894963 (pdgfrb)
04020 Calcium signaling pathway
125894963 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125894963 (pdgfrb)
04540 Gap junction
125894963 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125894963 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
efo01001
]
125894963 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
efo04090
]
125894963 (pdgfrb)
Enzymes [BR:
efo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125894963 (pdgfrb)
Protein kinases [BR:
efo01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125894963 (pdgfrb)
CD molecules [BR:
efo04090
]
Proteins
125894963 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
RIFIN
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
DUF3586
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
125894963
NCBI-ProteinID:
XP_049442682
LinkDB
All DBs
Position
LG9:25343030..25377916
Genome browser
AA seq
1097 aa
AA seq
DB search
MASKLHLTVTVTAALLYFCTELCCLEITPSDKELVLTEGSSLTLTCSGSGETTWEFKRDD
VPYFQVQNGGQSYEIVQSSSTSSVLKLKDVSWRHTGVYQCIDQHNGETKEVAVFVPDPDM
WFIESSHGMVTKTSEESTIPCVVTNPSINVTLYERDTDLPISGHYVPSEGYKALLEDRNY
VCRGELNGEVKESQSFYVFSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSW
DIPNREIINVEPLTDVLPDMSMHSCLIFPRATIAHSGNYICHVHEDIQGQSASASINITV
LERGFVDVKVPQHQNISAKLQENVELRVEIEAYPTPQVRWIKDGATIKGDKPITTRQEHE
IRYVTILTLVRVRTEQKGLYTVLVTNGDDTKEVTFDLEVQVPSQIKDLTDHPLPGKRHMV
TCVAEGVPTPTIQWYSCDSMHKCSNQTAMWQLLTPEPEVLSIQTNASYSKTRKTSQVRSQ
VTFHKLQHVTVRCETTNQAGLFDRRDVKLVSSTLYSQVAVLAAVLALVAIIIISIIILIA
VWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGSGAFGRV
VEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKH
GPLYLVTEYCRYGDLVDYLHRNKHTLLQYYAEKNQDDSCLISRGSTPLSQRKGYVSFGSE
SDGGYMDMSKDEPSLYVPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGGGRLDLAISDS
SVLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDS
NYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYS
ALKRGYRMAKPVHASDDVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLADSYKKKYNQVND
NFLKSDHPAVARTKPRLSSPFPIANPAFGSPSPPYIPPDPYNQSPSPREFTQEADTQEVI
TSYNEYIIPIPDPKPEDVFTDVPSESPASSLVLEEETDSLSQDTADTLPEEDRLEETSER
DALLGSSGTPEVEDSFL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagctccatctgacagtcacggttacagcagcgctgctgtatttctgcacc
gagctctgctgtctggagatcacacccagtgacaaagagctcgtccttactgagggctct
tctctcaccctcacctgctccggctcgggggaaacgacgtgggagttcaaaagagacgat
gtgccgtacttccaagttcaaaatggtgggcaaagctatgaaatcgtgcaaagcagttcc
acgtccagtgttttgaagttgaaggacgtgagttggaggcacacaggggtgtatcagtgc
attgatcaacacaatggagagactaaggaggtggctgtttttgttccagaccctgatatg
tggttcatagagagctcccatggcatggtaacaaagaccagtgaggagagcaccatcccc
tgtgtggtcaccaatcccagcatcaatgtcaccctatatgagagggacaccgatctgccc
atcagtgggcattatgtccccagtgaggggtacaaggcactgctggaggacaggaactac
gtgtgccgtggagagctgaacggggaggtgaaagagtctcagtccttctacgtcttcagc
attgttgtcccagaggccattgacgcctacatcaatgcgtcaaagaccgtcctgaagcag
ggcgaaccgctgacagtaaactgcacggtgcacggagtggagctggtgtttttttcctgg
gatatccccaacagagagattattaacgtcgagccgctgacagacgtcctgcccgacatg
agcatgcactcctgcctgatcttccctagggccacgattgcccacagcggaaactacatc
tgccatgtccacgaggatatccaaggccagagtgcctctgccagcatcaacatcaccgtg
ctcgagcgaggtttcgtggatgtgaaagttcctcagcatcaaaacatttctgcaaagctc
caagagaacgtggagctgagagtggagattgaagcctaccctacccctcaggtccgctgg
atcaaagatggcgccaccatcaagggagacaaacccatcacaaccagacaagagcatgag
atcaggtatgttactattctcaccttggtgagggtgagaacggagcagaagggcctttac
actgtccttgtcacaaacggagatgacacaaaggaggtgacctttgacctggaggtccaa
gttccctctcagattaaagacctgactgaccaccccctgcctgggaagagacacatggtg
acctgcgtagccgagggggtcccaaccccaactatccagtggtacagctgtgacagcatg
cacaagtgtagcaaccagacagcgatgtggcagctgctgacaccggagccagaggtgctg
agcatccagaccaacgccagctacagcaagactcgtaaaaccagccaggtgcggagccag
gtgaccttccacaagctccagcacgtcacggtgcgctgtgagaccaccaaccaagcagga
ctctttgacagaagagacgtcaaactggtgtccagcacgctgtactcccaggtggcagta
ttggctgctgttctagccttggtggccatcattatcatatccatcatcatcctcattgct
gtgtggaggaagaaacctcgctacgagatcaggtggaaggtgatagaatctgtgagccag
gacggtcatgagtacatctatgtggaccccatccacctgccctatgacctggcctgggag
atgccgcgagacaacctggtgctgggtcgcactcttggatcaggagcctttggcagagtg
gtggaggcaaccgcatatggtctcactcattcccagtccagcacaaaggtggctgtgaaa
atgctgaaatctacagccaggaggagtgagactcaggctctgatgtcagagttaaagatc
atgagtcacctgggtcctcacctcaacatcgtcaacttgctgggagcttgcaccaaacat
ggccctctgtacctggtgaccgagtactgtcgctatggcgatctggtggactacctgcac
aggaacaagcacaccctcctgcagtactacgctgagaaaaaccaagacgacagctgcctc
atctctagaggaagcactccgctgagccagaggaaaggctacgtgtcctttggaagtgag
agtgatggaggatacatggacatgagtaaagatgagccctcactctacgtgcccatgcag
gagcagattgacaccatcaagtatgcggacatccagccgtccccatatgagtctccctac
cagcaggacatctaccaggagcaaggtggcggcagattggacctggccatcagtgactct
tctgttctcacctatgacgacctgttgggcttcagctaccaagttgcgaaggggatggag
ttccttgcctccaagaattgcgtccatcgtgacctcgctgcccgtaatgtgttgatctgc
gagggcaagctggtgaagatctgcgacttcggcctggccagagacatcatgcatgattcc
aactacatctccaaaggcagcaccttcctgcccctgaagtggatggcaccagaaagtatt
ttccataatttgtacaccaccctgagcgacgtgtggtcatatggcattcttctttgggag
attttcacactgggaggaaccccctaccctgatttgcccatgaatgagttgttctacagc
gctttgaagagaggctaccgaatggccaaacctgtccatgcctcggatgacgtttacgag
atcatgaagaagtgctgggacgagaagtttgagaagaggcctgagttctccttcctggtc
cacagtgtggggaacatgttggcagacagctataaaaagaaatacaaccaagtcaacgac
aacttcctaaagagtgaccaccctgcagtcgcccgcaccaaacccagactctcctcaccc
tttccgatcgccaacccagcatttggctccccatctcccccctacatccccccggacccc
tacaaccagagcccgagccccagggaattcacacaagaggcagacacacaggaagtcata
acttcgtacaacgaatacatcattcccatcccagaccccaagccggaggatgttttcact
gacgtgccgtcagaaagccctgcaagctctctggttctggaggaggagactgactccctg
tcgcaggacactgctgacaccctcccagaggaggacaggctggaggagaccagcgagaga
gacgctctgctgggatcttctgggacgcccgaggtagaagacagtttcttgtag
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