Epinephelus fuscoguttatus (brown-marbled grouper): 125898995
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Entry
125898995 CDS
T08419
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04530
Tight junction
efo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125898995
09142 Cell motility
04810 Regulation of actin cytoskeleton
125898995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
efo04990
]
125898995
Domain-containing proteins not elsewhere classified [BR:
efo04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
125898995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
RNA_pol_Rpc82
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125898995
NCBI-ProteinID:
XP_049449074
LinkDB
All DBs
Position
LG12:complement(28425511..28517836)
Genome browser
AA seq
1688 aa
AA seq
DB search
MGNVESQNGDSGFYGDAMGHLSRKHTSRSLRLSSKQPVTRRSRHSSSVKQEHRNSDASTR
SSSTPSIPQSLAENGLEPFNATDEFGEFGINPHWTQRVAMTMRPESFQNDDDPLATPTPE
TSEADTVAQDGGEDSEGEGEGEGDVVGEERYLQRMTEGPREGGSFKKKRSKSADMWREDS
LEFSLSDLSQEHLTSTEEMVDGGEEEEEEQFTRPRGNAGSAERASSLDHLCSQQSPGLRG
QRSRYAKNRREAQCDGDGEGEEGLMSPTEEDGGGYGAFTLPCRRSHCLSEGLAGLGIPAA
PCPAFQGRRAQTTQDISGVLGEGSEYGDSGIDGVTTEIDGDGELVSRRCKAMSASFSVYS
ATESSVFNGSDSGSSSAGGGEGRGGEGGRGGVYENFRKELDNQAWTHQGRDCTEEAGSAV
SDEQSSGTLSSAYPSDALIGCAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVS
LKGCTLFLYESDGRSGIDHNSVPKHALWVENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQ
TSGQTELENWITAIHSACAAALARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQL
STVTDAKKRKTILEQIFLWEQNLERFHMDLFRCRCYLASLQGGEPPNPKRLLGFASRPTK
LAMGRLGIFSVSSFHALVSARTESSIRRRNQAMPRTFSKRRSRFSSLWGLDTASKRKTKG
HPSINQVFVDGMEPVRKPLERMFEDSASEKSKEREGSVKILPQQNVDSDIWVPDYLTPSW
VCLPNNQPVLAIIQPGETALEVLSTVCKTHKIDPSGHYLCLKMWIDNQMLFYVPTLEEDI
SDLLYKEIEICPKATKVIRFDKAESCTIGYGFSVAVIDEDGMQQLHITEVKTEGLASAKG
LKAGDEILLLNGKPASALQMDDMRAAFVNQALTLSISTLPQLDPQVLCSLPPRRSDGEQD
PATDIFSQSQEDILDEVSGLTAESPDESMEEGSRLTLQSPGNHPEDKTCMGTGQKSTEQV
TAFCRSLHDMNPLECPMSSSSSSSSSSLSPSPVSALPPTAGAAAQRQLSHADKLRKVINE
LVETEKTYVKDLSCLIECYLTPLQKESFLTQDELDVLFGNLGEMVEFQVEFLRTLEDGIR
LVPDLDKLERVEQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPDFKA
FLAERNPRQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKV
ASHINEMQKLHEEYGAVFDQLINEQTADKKEVADLSMGDLLLHSTVVWINPPASLVKSKK
DPELAAFVFKTAVVFVYKDSSKHRKKIGASHRASVSDDRDPFRFRHMIATDSLQVRALAN
SEGTAVCEIVHTRSESEGRPERTFQLCCSSPDSKKDFLKAVHSILREKQRRQLLKTESLP
PNQQYVPFGGKRLCALKGMRPSMNRAASAPSRRLARRKLVRNRFTIDTDLVFHGNNNNSN
DPDTSHHSSYPSSYPLLPQHSLPLSHKPQGEDTDRWVEEQFDLGCYEDQGECIDLGQVKE
TDILSDDDEYCKSVRAASAEPADLKGKMEGLDLQDREMPSHNLNGRAEAGIVLSVMQEEE
VDRIKHGDDSGSIDSFTSCGVSLSRSATPTLKLAPLKQCAVEGATNKDHDVIWVRRDDFA
NSCNSDVF
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtggagagtcagaatggggacagtggtttctacggcgacgcaatgggacat
ctctcccgcaagcacacgtcccggtcactccgtctctccagcaagcagccagtcacccgc
cgttcccggcactcttcttcagtgaaacaggaacacagaaactctgatgcctcaactcgc
tcctctagcaccccgagcatcccacaatccttagcagagaacggactggagcctttcaat
gcaacagatgagtttggagagtttggcatcaatcctcattggacgcaacgtgtcgctatg
acaatgagaccggagtcctttcaaaatgacgatgaccccttggccacgccaactccagaa
acctcagaggcggacactgtcgctcaggatggaggagaggattctgagggggagggggaa
ggggagggagatgttgttggtgaggagaggtacctccagcggatgaccgagggtccacgg
gagggagggagttttaaaaagaagcggtctaagtcagcagacatgtggagagaagacagc
ttggagttttctctgtctgacctgagccaggagcatctgaccagcactgaagagatggta
gatgggggagaagaagaagaggaggagcagttcacacgccctagaggcaacgcaggctca
gctgaaagggcatcttctctggaccatctgtgcagccagcagagtcctggcctcaggggg
cagaggagccgctatgctaaaaaccggagagaagcacagtgcgatggagacggagaaggg
gaggaggggttgatgtctccaaccgaggaggatggtggcgggtatggagcatttacgctc
ccctgccgacgctcccactgcctgtcagagggcctggcagggctcggcatccctgctgca
ccgtgccctgctttccagggacggcgtgcacaaactactcaggacatctctggtgttttg
ggtgagggaagtgagtatggcgacagtggcatcgatggcgtcaccacagagatagacgga
gacggagagttggtgtcacggcgctgtaaggccatgtcggcctctttctcagtgtactca
gctaccgagagcagtgtctttaacgggagcgacagcgggagcagcagcgcaggaggagga
gaaggacgaggtggcgagggaggcaggggaggagtgtatgagaatttccggaaggagctg
gacaatcaagcctggacacatcagggtcgggactgcacggaggaggctggctccgctgtg
agtgacgagcagagcagtggcacactcagcagtgcatatccatcggacgctctgattggc
tgtgcacaaggtacagtcaggaaggcaggggctctggctgtgaagaacttcttagtgcat
aagaaaaacaagaaagtggaatctgcaacaaggcgcaagtggaaacactactgggtctct
ctgaaaggctgcactcttttcctgtatgagtcagatggtcgctctgggatcgaccacaac
agcgtccccaagcatgcattgtgggtggagaacagcattgttcaggccgtccctgaacac
cctaagaaagactttgtcttctgccttagcaactcagtgggagatgctttcctcttccag
acatctggccagacagaactggagaactggattacggcgatccactctgcatgcgccgct
gctctggctcggcagcatcacagggaggatacagtgcgtctgctgcgaaccgagatccgc
aagctcgagcagaagatcgacatggacgagaagatgaagaagatgggagacatgcagctg
tctaccgtcaccgacgccaagaagagaaagactatactggagcagatcttcctgtgggag
cagaacttggagcggtttcacatggatctgttccgctgccggtgctacctggccagtcta
cagggcggtgaaccccccaaccccaaacgcctgctgggcttcgcttcacgtcccaccaag
ctggccatgggacgactgggcatcttctctgtctcttccttccatgcactggtgtcagcc
cgaacagaaagcagcatcaggaggcggaaccaggccatgcctcgcaccttcagtaaacgt
cgcagccgtttctcctccctctggggactggacaccgcctccaagagaaagactaagggg
catccttcaatcaaccaggtcttcgttgatgggatggagccggtgaggaagccattggag
cgcatgtttgaagactctgccagtgagaaatctaaggagagagagggctcagtaaaaatc
cttcctcagcaaaacgtagacagtgacatttgggttcccgattacctgactccctcctgg
gtgtgcctgccgaacaatcagcctgtcctggccatcatacagcccggcgagacagcgctg
gaagtcctgagcaccgtctgcaagacccacaagatagacccctccggccactacctgtgt
ttgaagatgtggattgacaaccaaatgctcttttatgttcccacgctcgaagaggacatc
tctgatctgctctacaaagagattgagatttgccccaaagctaccaaggtgatccggttt
gacaaagcagagtcctgcaccattggatacggtttttctgtggcagttatagatgaagat
gggatgcagcagcttcatattactgaagtgaaaaccgagggactggcctctgctaaaggt
ttgaaagcaggggacgagattctgctgctgaatggtaaacctgcatctgccctccaaatg
gatgacatgagggctgcatttgtaaaccaagcgttgaccttaagcatcagcaccctgccc
cagctggatcctcaggtgctgtgctcccttccaccccggcgctctgatggggagcaggac
ccagccacagacatcttctcccagagccaagaggacatcctggatgaggtgtcagggttg
acggcggagagcccagatgagagtatggaggaaggatctcggctgaccctgcagagtccc
ggcaatcatccagaagacaaaacctgcatggggactggacagaagagcacggagcaggtc
actgctttctgccgcagcctccatgacatgaatcccctggagtgccctatgtcatcctcc
tcgtcctcgtcctcgtcctccctctccccgagccctgtgtcagctttaccacccacggca
ggcgctgccgcccagagacagctctcccacgcagacaaactacgcaaggtcatcaatgaa
ctggtggagacggagaagacttacgtcaaagacctcagctgcctgatagagtgctacttg
acacctttgcagaaagagagcttccttacacaagatgagctggacgttttgttcggtaac
ctcggggagatggtggagttccaggtggagtttctccggacgctggaagatgggatcaga
ctggtgccagatctggacaagcttgaaagagtggagcagtttaagaaagtgcttttctcc
ttgggtggttcattcctgtattatgccgatcgcttcaagatctacagcgccttctgcgcc
agccacaccaaggtcccaaaggtcctggctaaagcaaagaccgacccagatttcaaggct
ttcctggctgagagaaacccaagacagcaacattcatccactctggagtcttacctgatc
aaacccatccagagggtcctgaagtacccgctgctgctaagggagctctactctctcact
gaccccgacagtgaggaacactaccacctagatgttgcaatgaaggccatgaacaaagtt
gcgagtcacatcaatgagatgcagaagcttcatgaggagtacggagctgttttcgaccag
ctcatcaacgaacagacggcagataaaaaagaggtggctgacctctcaatgggggatctt
ttgttacattccactgtggtgtggatcaaccctccagcctctttggtgaagagcaaaaag
gatcctgagttggctgcttttgtgttcaaaacagcagttgtatttgtatacaaagacagc
tccaagcaccggaaaaaaatcggtgcatctcaccgcgcgtctgtgagcgatgacagagat
cctttccgtttccgtcacatgattgcaacagactctctgcaagtccgtgcccttgcaaac
tcagagggtacagcagtgtgtgagatagttcacacaagatctgaatctgaaggaagacct
gagagaaccttccagttgtgctgcagttctccagatagtaagaaggacttcctgaaagca
gtccactccatccttagggaaaagcagcgccgccaacttcttaagacagaatctctgccc
cccaaccagcagtacgtcccatttgggggcaaacgtctgtgtgcccttaaagggatgcgg
ccctccatgaacagagcagcatctgctccatcgcgaaggctggcccgcaggaagctggtg
aggaaccgcttcaccatcgacaccgacctggttttccatggcaacaacaacaacagcaac
gatccagacacttcccaccactcctcctacccttcctcttaccccttgctgccccagcat
tctcttcctctatcccacaaacctcaaggagaggacacggaccgttgggtggaggagcag
ttcgacctgggatgctatgaagaccagggcgagtgcatcgacttggggcaggtgaaggag
acggacattttgagcgacgacgacgagtactgcaagtctgtccgggccgcgtcggcagaa
ccagctgacctgaaggggaaaatggagggactcgacctacaggacagagagatgccgagc
cataacctgaatggacgggcagaggctgggatcgtgctgagtgtgatgcaggaggaggaa
gtcgatcgaataaagcatggtgatgattcaggctcaatagactccttcacctcctgtggt
gtctctctgtcccgcagtgcaaccccgactctaaagcttgctcctttgaagcagtgtgct
gtggagggggccacaaacaaggaccatgatgtcatctgggtgaggcgggatgactttgct
aacagctgcaacagtgacgtgttctga
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integrated database retrieval system
