Epinephelus fuscoguttatus (brown-marbled grouper): 125900775
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Entry
125900775 CDS
T08419
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04620
Toll-like receptor signaling pathway
efo04621
NOD-like receptor signaling pathway
efo04622
RIG-I-like receptor signaling pathway
efo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125900775 (traf3)
04621 NOD-like receptor signaling pathway
125900775 (traf3)
04622 RIG-I-like receptor signaling pathway
125900775 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125900775 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
DUF4201
zf-TRAF_2
Baculo_PEP_C
Sina_ZnF
zf-RING_4
MctB
SPAM
Crescentin
Fzo_mitofusin
Snapin_Pallidin
TPR_MLP1_2
DUF724
KxDL
FapA
Fez1
EzrA
GAS
DUF1664
Motif
Other DBs
NCBI-GeneID:
125900775
NCBI-ProteinID:
XP_049451949
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Position
LG14:complement(5591338..5612157)
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AA seq
588 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLTTPLSVVPPIPQPSHRQANPWPPSDPTASQGVPAGFL
PLHGGFRDHFVETPEAKYCCEACRLVLCQPRQTECGHRFCQSCIKDILSHPNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFYEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCTFSSLP
RSELSSHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTFAAEHLRMMASRNSTLENKV
EDIKGELLERYKVLPALSSRLSELENQNDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVENLRGTLENVRTRLNALEQGGRSGTGSTTHTLASLETQLSVHEIRLA
DMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCARVYL
NGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPNSSS
FRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccacacccctatcggtggtcccgcccatccctcagccctctcaccgccaa
gccaatccctggcctcccagcgaccccactgcttcacaaggtgtccctgcaggtttcctg
cctcttcacggaggattcagagatcactttgtagaaactccagaagccaaatactgctgc
gaggcctgcaggctggtcctgtgtcagccccgccagactgagtgtggacaccgcttctgt
cagagctgcatcaaggacatcctcagtcacccaaacccggtatgtccagctgacatggag
cctttgttcaaagacaagatcttccgagacgtttgctgccatcgggagatcatggcacta
aaggtttactgtcgtagtgaagctaacggctgtcaggagcagatgagtctgcagcagata
cctgaccacctgaatgtgtgtccgttctacgaggttccctgtccattggggaaatgtaaa
gagcgaatgatgaggaaagagattcccgaccacctgagctggaaatgtaaacacagagag
accagctgcgagttctgcatgaccaagatgcctctgactgacctgcagaaacacaaagag
acggtgtgtccagcgttcccagtgtcgtgtccgaaccactgcaccttctcgtcccttccc
cgcagtgagctgtccagtcaccagcatgactgtcccaaagctcaggtgagctgtcagttc
caccgctatggctgcaccttcaagggtttgaaccaggacatgaggcaacatgagtcgacc
tttgcagctgaacacctgagaatgatggccagcagaaactccacgttagagaacaaggtg
gaggatattaaaggtgagctgttggagaggtataaggtgcttcctgctctcagcagtcgg
ctgtctgaactggagaaccagaacgatgagctgagagagaagaaccgacagatggagcag
aaactggccaccatgcagaaactaatgagctcgcactcagagaagctcctggaggtggag
ctggagcttcgttctctccgcgtgctcagagatgaggtggagaacctgagaggaacgctg
gagaacgtccggacaagactgaacgctctggaacaggggggacgcagcgggaccgggtcc
acaacacacactctggcttccctggagactcagctaagtgtccatgagatccgattggcc
gacatggacctgcgtttccaggtgctggagacagcaagctacaatgggactctgatctgg
aagattcgtgactacaagagacggaaacaggaagcggtagctgcaaagacactgtccttg
tactcgcagccattttacaccggatacttcgggtacaaaatgtgcgcccgcgtctacctg
aacggagacggcatgggcaaggggacgcatctgtcgctgttttttgtggtgatgaggggc
gagtacgacgcactgctgccctggcccttcaaacagaaggtgactctgatgctgatggac
cagggaccgtccaggaaacacttgggggacgcctttaagcctgatccaaacagcagcagc
ttcaggcgtcctgcagcagagatgaacatcgcctccggctgccctctgtttgtgtctcag
agcgtcctggagaccggcagctacatcaaagacgacaccatcttcatcaaagttaccgtg
gatacctctgaccttcctgacccgtga
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