KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125903630
Entry
125903630         CDS       T08419                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:efo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125903630 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:efo03041]
    125903630 (smndc1)
Spliceosome [BR:efo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125903630 (smndc1)
 Complex B
    125903630 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    125903630 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR Chalcone DUF2730 PUA_4
Other DBs
NCBI-GeneID: 125903630
NCBI-ProteinID: XP_049456622
LinkDB
Position
LG16:17172914..17178404
AA seq 237 aa
MSDDLVKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPTESASS
TNGADTVPLKHAWKVGDNCMAVWNQDGQVYEAEIEEIDRENGTAAVTFAGYGNAEVIPLQ
NLRPAEEGKRSDEDGLKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQF
NNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtgaaacagttgagcagctataaagctcagctacagcaagtagaa
gttgccttatccaccgacccagataatgaagacctcctcaaacttcagaaagacttacag
gaagtcatcgatttgacaaaagacctcctgacctcacagcccactgaaagtgcttccagt
accaatggcgcagacacagtgcccctgaagcatgcctggaaagtgggggacaactgtatg
gctgtgtggaatcaggatggacaggtgtatgaggctgagattgaggagatagaccgggag
aacggcactgcagcagttacctttgctgggtacgggaatgctgaagtgattcctctgcag
aacctcagaccagctgaggaggggaaacgctctgacgaggacggtctaaagccaaaatca
aggaaagagcagatagcagagcagagagagtataagaagaagaaggcacagaagaaggtg
cagaggatgaaggaattggagcaagagagggaggaacagaagtcaaagtggcaacagttc
aacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgcgtct
ccagaaagcgtcaatgggaaggtgggagtgggaacatgtggtattgcagacaagccaatg
acccagtaccatgacacgtcaaaatacaacgtcagacatctaatgccacaatga

DBGET integrated database retrieval system