Epinephelus fuscoguttatus (brown-marbled grouper): 125903682
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Entry
125903682 CDS
T08419
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04060
Cytokine-cytokine receptor interaction
efo04672
Intestinal immune network for IgA production
efo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125903682 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125903682 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125903682 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
efo04052
]
125903682 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125903682 (cxcl12a)
Cytokines and neuropeptides [BR:
efo04052
]
Cytokines
Chemokines
125903682 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Chemokines
125903682 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
125903682
NCBI-ProteinID:
XP_049456705
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All DBs
Position
LG16:complement(22585592..22592707)
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AA seq
98 aa
AA seq
DB search
MDMKLLAVVAALMVVTYMPPAQAKPISLVERCHCRSTVNSLPRSYIRELRFIHTPNCPFQ
VIAKLKTNKEVCVNPEIRWLQQYLKNAINKMKKSKQSN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagctgctggcagtcgtggctgcgctcatggtggtgacatatatgcctcca
gcacaagcaaagcccatcagtctggtggagagatgccactgccgctcaacagtcaacagc
ctccctcgaagctacatcagggagctcagattcatccacacgcccaactgccccttccaa
gtgattgccaagctgaagacaaacaaagaggtgtgtgtgaacccggagatccggtggctg
cagcagtacctgaagaatgccattaacaagatgaagaaatccaaacagagcaactaa
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