Euwallacea fornicatus (polyphagous shot-hole borer): 136342408
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Entry
136342408 CDS
T10685
Symbol
Kdm2
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1 isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136342408 (Kdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efor03000
]
136342408 (Kdm2)
04121 Ubiquitin system [BR:
efor04121
]
136342408 (Kdm2)
03036 Chromosome and associated proteins [BR:
efor03036
]
136342408 (Kdm2)
Enzymes [BR:
efor01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
136342408 (Kdm2)
Transcription factors [BR:
efor03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
136342408 (Kdm2)
Ubiquitin system [BR:
efor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
136342408 (Kdm2)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
136342408 (Kdm2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
136342408 (Kdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
LRR_4
JmjC
F-box
Cupin_8
JHD
RAD51D_N
Motif
Other DBs
NCBI-GeneID:
136342408
NCBI-ProteinID:
XP_066144266
LinkDB
All DBs
Position
12:complement(2185506..2200272)
Genome browser
AA seq
1015 aa
AA seq
DB search
MAHRERKFSSRLPDRQGYISRMRERKQKKLYSDDWALGDEDDLEGRRTFNLQEKLEDRVF
ESHGMVKEMRGEELNVAYFQKYGFNTPLLFKDKTGLGIRVPSSNFSINDVRVSVGSRRVL
DVMDVSTQKNSEMTMKEWQKYYEDPNKARLLNVISLEFSHTKLENYVQSPTVVRQIDWVD
CVWPRHLKESQIEATNLLEDMKYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILKGCKV
FWLIPPTEHNIDLYERWCLSGKQSDIFFGDTVEKCARIVLHAGQTFFIPTGWIHAVYTPM
DSLVFGGNFLHSFGIEKQLKCAQVEDNTKVPQKFRYPFFTEMLWYVLERYVHCILGNCHL
TSGQNVKLSQDKIHIHLTQAELHGLKDIVRYLHMLPSNKKNLPDLIRDPIALIQDVRTLI
GLHRQDTRELAITNRPILSLPHDDKRKHFYGKTSPNNVIRTPKPPGAFKGPKTSPGSAPG
DKGGPRRRRTRCKKCSACQRADCGECTFCLDMVKFGGPGRAKQTCNMRQCLQPMLPVTAA
CARCGLDGWMQTPVAPLQKGPQRCDTPSTLMECSVCYEIAHPQCVQRLCQDYSGYINEDM
PNSWECPLCCKMGKNTDYRPRHFRARQKSSDIRRISISSDASSAFENKIQPEHSDSGSDN
DQKDPKLQELLPIKKRRSSDNSEIDTKVIPPPIANDGHRKTAFRMQLAHQIASNSTKVLK
KPIVVVRPAPLMINPIVPTNNLVLDKRVILCIFKYLTPLELLNCALVCKTWATYSIDPSL
WKRMEFDHKKISSDMLKGTVRRQPEILSLNWCRINHFQLPWLIQRLNNLKQLYLQSIDVK
SAISLRTNHSAILQVLDLSFISDFNDLALREILGTNNDARSGLAGDKIRFRNLKTLKLAG
TDITDIAMRYVTQYLPNVENLSMSMCPRISDAGIAQLTTKPANTVANLVTLDLSHAKLVT
EVSLEHLSKCEKLTRLDCRQALNISTQALIKFAAKSKHDLQVREIKLVDIRHKSQ
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatagggaacgtaagttctcctcccgtcttccggatcggcagggctacatctct
cgtatgcgcgaacgcaagcaaaagaaactctattccgacgactgggcattgggtgacgaa
gatgacctcgagggccggaggacgtttaatctgcaagaaaagttggaggatcgagtgttc
gagtcccacgggatggtcaaggagatgagaggcgaggagctgaacgtcgcttattttcag
aaatatgggttcaatactcctttactctttaaggataagactggtttaggcatcagagta
cctagttcaaatttttcaataaacgacgtgagagtaagtgtgggctctaggagggttctc
gacgtaatggacgtcagtactcaaaagaacagcgaaatgaccatgaaagaatggcagaaa
tactacgaagatcctaacaaggcgcggctgttaaacgtgatctcactggagttctctcac
actaagttggagaactacgttcaaagcccgacggtagtaaggcaaattgattgggtggat
tgtgtatggcctaggcacttgaaagagagtcaaatcgaggctactaatctgcttgaggac
atgaaatatccaaaggtgcagaagtattgcttgatgtctgttaaaggttgttatacagac
tttcacattgactttggtggaacctctgtttggtaccacattttaaaaggctgcaaagta
ttttggttaattccccctacggaacataatattgatctctatgaaaggtggtgcctttcc
ggcaagcaatcggacattttctttggagatactgtggaaaaatgtgcaagaatcgttctc
cacgccggccagacatttttcatcccaacgggctggatacacgcagtatacactccaatg
gattctttagtttttggagggaattttctccattcattcggaatagaaaagcaattgaaa
tgtgcgcaagttgaagataatactaaggttccccaaaaatttcgctacccatttttcaca
gaaatgctctggtatgtgctggaacgttatgtgcattgcattttagggaattgccatttg
acttcaggtcaaaatgtaaaactttcgcaggacaaaattcacattcacttgacccaagcc
gagctgcacggtttaaaagacattgtgaggtatcttcacatgctaccctcaaacaagaaa
aatcttcctgatctgatcagagacccaattgctttgatccaagatgtacggacgttgatt
ggtttacacagacaagataccagggaattagctataacaaacagaccaatattgtcatta
ccccacgatgataagagaaaacatttctatggcaaaaccagccccaacaatgtgatcagg
acaccgaaacctcctggtgctttcaaaggacctaagacgtcacctggatccgcccctggt
gacaaagggggtcctcggagacggcgtacgaggtgtaaaaaatgttcagcatgccagcga
gccgattgtggtgaatgcacattctgtttggatatggtaaaatttgggggcccaggaagg
gctaaacagacttgcaatatgcgacagtgcttgcagcccatgttaccagtgacagctgct
tgcgctaggtgtggattggatggatggatgcagactccagttgcaccattacagaaaggt
cctcagagatgtgatacgcccagtactcttatggaatgttcggtttgctatgaaatcgca
catccacaatgcgtgcaacggctctgccaagattatagtgggtatatcaacgaggatatg
cctaattcttgggaatgtccgttgtgctgtaaaatggggaaaaataccgattataggccc
aggcatttccgtgccagacaaaaatcttcagacatccgaagaattagtataagttctgat
gcgtcaagtgcatttgagaacaaaattcagccggaacattctgattcagggagcgacaat
gaccaaaaagatcccaaattgcaggaattgttaccaatcaaaaaaaggcgatctagcgac
aattccgaaattgacaccaaagtgattcctccacccatcgccaatgacggccatcgaaag
actgctttcaggatgcaactggctcaccagatagcgagcaatagtacaaaggttttgaaa
aagcccattgtagtggtgagaccggcgccgcttatgataaatccaatagttcccacgaac
aatttagtgttagataagagagtcattttatgcatatttaagtacttaacaccgttggaa
cttttgaattgcgctttagtctgtaaaacatgggccacatattccatcgacccgtccctt
tggaaacgcatggaatttgatcacaaaaagatctcgagcgatatgctgaaaggcactgtg
cgtcgccaacccgaaattctcagcctaaactggtgtagaatcaatcattttcaattgcca
tggctcattcaaaggttgaacaatttaaagcagctatatctgcaaagcatcgatgtgaaa
agtgccatttctctacggacgaatcactctgccatcttgcaggttctggatttgagcttt
atttcagactttaacgatttggcactaagggagatcttgggtacgaacaatgatgcgcgc
tcaggtttagcgggagacaaaatccgtttccgcaacttgaaaactctgaaattggcaggt
accgatataactgacatagccatgcgttacgtcacacagtacctacccaacgttgagaac
ctgagtatgagcatgtgcccgaggatatcggacgcgggtatcgcgcaactcaccacgaaa
cccgcaaacacagtcgcgaacttggtgactttggacttgagtcacgccaaactggtgact
gaagttagtttagaacatttgtcgaaatgcgagaaactgacgcgattagactgcagacag
gctttgaacatttccacgcaagctttgattaaattcgcagctaagagtaaacacgatctg
caggtgcgggagattaagttggtggatattaggcataagtcgcagtaa
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