KEGG   Euwallacea fornicatus (polyphagous shot-hole borer): 136343080
Entry
136343080         CDS       T10685                                 
Symbol
Roc1a
Name
(RefSeq) RING-box protein 1A
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
efor  Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03420  Nucleotide excision repair
efor04120  Ubiquitin mediated proteolysis
efor04141  Protein processing in endoplasmic reticulum
efor04310  Wnt signaling pathway
efor04341  Hedgehog signaling pathway - fly
efor04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:efor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    136343080 (Roc1a)
   04120 Ubiquitin mediated proteolysis
    136343080 (Roc1a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    136343080 (Roc1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    136343080 (Roc1a)
   04341 Hedgehog signaling pathway - fly
    136343080 (Roc1a)
   04350 TGF-beta signaling pathway
    136343080 (Roc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:efor04121]
    136343080 (Roc1a)
   03400 DNA repair and recombination proteins [BR:efor03400]
    136343080 (Roc1a)
Enzymes [BR:efor01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     136343080 (Roc1a)
Ubiquitin system [BR:efor04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   136343080 (Roc1a)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     136343080 (Roc1a)
   Cul2 complex
     136343080 (Roc1a)
   Cul3 complex
     136343080 (Roc1a)
   Cul4 complex
     136343080 (Roc1a)
   Cul7 complex
     136343080 (Roc1a)
   Cul8 complex
     136343080 (Roc1a)
   Cul9 complex
     136343080 (Roc1a)
DNA repair and recombination proteins [BR:efor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      136343080 (Roc1a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      136343080 (Roc1a)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 136343080
NCBI-ProteinID: XP_066145566
LinkDB
Position
13:complement(2462688..2464251)
AA seq 113 aa
MAAAMDVDMDEVEAPTSSSSKGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 342 nt   +upstreamnt  +downstreamnt
atggcagcagcaatggatgttgatatggatgaggttgaagcgccaacttccagcagctcc
aaaggagagaaaaaacggttcgaagtaaaaaagtggaatgcagttgctttatgggcatgg
gacatcgtggttgataactgtgctatctgcagaaaccacataatggatttgtgtattgaa
tgccaggccaatcaggcttctgccactagtgaagaatgcacagtggcatggggagtatgc
aatcatgcatttcatttccattgcatctcaagatggttgaagaccaggcaagtgtgccct
ttggacaatcgagaatgggaattccaaaaatatggtcactaa

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