Eptesicus fuscus (big brown bat): 103293218
Help
Entry
103293218 CDS
T09083
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103293218 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efus03041
]
103293218 (EFTUD2)
Spliceosome [BR:
efus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103293218 (EFTUD2)
Complex C
U5 SnRNP specific factors
103293218 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
103293218
NCBI-ProteinID:
XP_054565408
LinkDB
All DBs
Position
20:complement(37445105..37481116)
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagctagattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgacgacgat
gatgatgatgatgtaggtgaccacgatgaagaccaccctgggatggaggtggtgctgcat
gaagacaaaaagtactaccccacagctgaagaggtgtatggtcctgaggtggagaccata
gttcaggaggaagacacccagcccctcacagaacctattattaagccagtgaaaaccaag
aaattcactctgatggagcagacgttacctgtcacggtgtatgaaatggatttcttggca
gatctgatggataactcagaactcatcagaaatgtgaccctttgtggccatctccatcat
ggcaagacgtgttttgtagattgtttaatagagcagactcatccggaaatcagaaagcgc
tatgaccaggatctatgctacactgacatcctcttcacagagcaagagagaggtgttggc
atcaaaagcactcctgtgacagtggttttgccagatactaaaggaaaatcttacctcttc
aatatcatggacactccaggacacgtgaatttttctgatgaggtcacggctggcttgcgc
atctcagatggagtggtgcttttcatcgatgctgccgagggcgtgatgctgaacacagag
cggctgatcaagcatgcagttcaagagaggctggcggtcaccgtgtgcatcaacaagatc
gaccggctgatcctggagctgaagctgccacccacggacgcatattacaagctgcgccac
attgtggatgaggtcaatggattgataagcatgtattccactgatgagaacctgatcctg
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctatgctgacacgttcggtgacattaactaccaggaatttgct
aaaagactttggggtgacatctacttcaaccctaagacgcgaaagttcaccaaaaaggcc
ccaaccagcagctcacaaaggagcttcgtggagtttatcttggagcccctgtataagata
ctcgctcaggttgtgggggatgtggacaccagcctcccgaggaccctggacgagcttggc
atccacctgaccaaggaggagctaaagctgaacatccgccccctgctcaggctggtctgc
aaaaagttctttggcgaattcacaggttttgtggacatgtgtgtgcagcatatcccttct
ccgaaggtgggcgccaagcccaagatcgagcacacttacaccggcggtgtggactccgac
ctcggcgaggccatgagcgactgtgaccctgatggtcccttgatgtgccacactaccaag
atgtacagcacagatgacggagttcagtttcatgcctttggccgggtgctaagtggtacc
atccatgctgggcagcctgtgaaggtgctgggggagaactacactctggaggatgaggaa
gactcccagatctgcaccgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgcgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaatcgtg
aagacggcaaccataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacatctgttatcaagattgctgtggagccagtcaacccctccgagctg
cccaagatgctggacggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggcgagcacgtgattctggggactggggagctctacctggactgtgtg
atgcatgatttgcggaagatgtactccgagatagacatcaaggtggctgaccctgttgtt
accttttgtgagactgtggtagaaacatcctctctcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctcttgaaaagggccttgctgaagacatc
gagaatgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccaaacc
aagtacgattgggatctgctggctgcccgttccatctgggcttttggccctgatgccacc
ggccccaacatcctggtggatgacaccctgccctctgaggtggacaaggctcttctgggc
tcagtgaaggacagcattgttcaaggtttccagtggggaaccagggagggacccctctgt
gatgagttgattcgaaatgtcaagtttaagatcctagatgcagtggttgcccaagagccc
ctgcatcggggcgggggccaaatcatccccacagccaggagagttgtctattctgccttc
ctcatggccacgcctcgcctgatggagccttactacttcgtagaggtccaggcccctgca
gattgtgtctccgctgtttatactgtcctggcccggcgcagggggcacgtgactcaggat
gcacccattccaggctcccctctctacaccatcaaagctttcatcccggctatcgactct
tttggctttgagactgatctgcggactcacacccaggggcaggccttttccttgtctgtc
tttcaccattggcagattgttcctggggatcctctggataagagcattgtcatccgcccc
ttggagccacagccagcgcctcacctggcccgggagttcatgatcaaaacccgtcgtaga
aagggcctgagtgaagacgtgagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaagatgttgtactcaattaccccatgtga
DBGET
integrated database retrieval system
