Duffyella gerundensis: EM595_1715
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Entry
EM595_1715 CDS
T04258
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ege
Duffyella gerundensis
Pathway
ege03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EM595_1715 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_1715 (nth)
Enzymes [BR:
ege01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EM595_1715 (nth)
DNA repair and recombination proteins [BR:
ege03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EM595_1715 (nth)
Prokaryotic type
EM595_1715 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CUU23949
UniProt:
A0A0U5E9W3
LinkDB
All DBs
Position
1:complement(1840642..1841277)
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AA seq
211 aa
AA seq
DB search
MNKEKRIEILTRLRDNNPHPTTELVFNSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PEAMLALGVDGVKSYIKTIGLFNSKAENVIKTCRLLIERHNSVVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGKNVDLVEEKLLKVVPAAFKVDCHHWFI
LHGRYTCVARKPRCGACIIEDLCEYADKTEI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagaaaaacgtattgaaattctgacccggctgcgggacaacaatccgcatccc
accaccgaactggtgttcaactcgccttttgaactcctgattgcagtactgctgtcagcg
caggccaccgacgtcagcgtcaataaggcgacggcgaagctctacccggtggcgaatacg
ccggaagcgatgctggcgctgggcgtggacggcgtgaaaagctatatcaaaaccattggc
ctgtttaacagcaaagcggaaaacgtaatcaagacctgccgcctgctgattgaacgccac
aacagcgtagtgccggaagatcgcgccgcgctggaggcgttgcctggcgttgggcgtaaa
accgccaatgtcgtgctgaataccgcatttggctggccaaccatcgccgtggatacgcat
atttttcgcgtctgcaatcgtacccgttttgccccgggtaaaaacgtcgatctggtggaa
gagaagctgctgaaagtggtgccagccgcttttaaagtcgattgccatcactggtttatt
ttgcacggccgctatacctgtgtggcacgaaaaccgcgttgtggcgcctgcattatcgaa
gatctgtgcgaatacgctgataaaaccgagatttaa
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